Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01464 ATGGGGATATATCTGAGTACTCCCAAAACTGAGAAATTTTCTGAAGATGGAGAAAGTGATAATCTTAGATATGGTTTATCGTCCATGCAAGGATGGCGTGCAACAATGGAAGATGCTCATGCTGCGTATACTGATCTGGATGAGTCTACTTCGTTTTTTGGTGTTTATGATGGTCATGGAGGTAAGGTGGTTGCAAAGTTTTGTGCTAAGTTTCTTCACCAACAGATGCTTAAAAGTGAAGCATACTTGGTTGGAGATATTGGAACCTCTCTTCAAGAATCATTTTTAAGAATGGATGAGATGATGCGTGGTCAAAGAGGATGGAGGGAGCTATCAATCTTGGGAGATAAGATAAACAAGTTTACTGGGATGATAGAAGGGCTGATTTGGTCTCCACGAAGCAGCAATGGTATTAGCAGAGTTGATGATTGGGCTTGTGAGGAGGGGCCTCATTCTGATTTTGCTGGACCAACTTCAGGAAGCACAGCCTGTGTTGCAGTTATTAGAAACAACCAACTTCTTGTCGCAAATGCTGGTGATTCACGTTGTGTAATATCTCGGAAGGGACAGGCATACAATTTGTCTATAGACCACAAACCTGATCTTGAGATTGAGAAGGAAAGAATTTCGAAAGCTGGTGGTTTTATTCATGCAGGAAGAGTAAATGGCAGTTTAAACCTTACAAGAGCTATTGGTGACATGGAATTTAAACAGAACAAATTTCTTCCTGCTGAAAAACAAGTTGTAACTGCCAATCCAGATATTAACACTGTTGAGCTTTGTGACGAAGATGAATTTATGGTTCTAGCTTGTGATGGCATATGGGACTGCTTGTCAAGTCAACAATTGGTAGATTTTGTTCATGAACAACTGCGTTCGGAAACAAAACTTTCCGCTGTGTGCGAAAGAGTGTTTGACCGGTGTTTGGCACCATCAACTGCTGGTGGCGAAGGATGTGATAACATGACTATGATCTTGGTCCAGTTCAAAAAACCTGCTCAGTCCAGTGCACCAGCACAAGACCAATCCTCATCAAAAGAACAAGCTGAATCACAAGTTGAACCGAAAGAAGTTTAG 1077 0.4132 MGIYLSTPKTEKFSEDGESDNLRYGLSSMQGWRATMEDAHAAYTDLDESTSFFGVYDGHGGKVVAKFCAKFLHQQMLKSEAYLVGDIGTSLQESFLRMDEMMRGQRGWRELSILGDKINKFTGMIEGLIWSPRSSNGISRVDDWACEEGPHSDFAGPTSGSTACVAVIRNNQLLVANAGDSRCVISRKGQAYNLSIDHKPDLEIEKERISKAGGFIHAGRVNGSLNLTRAIGDMEFKQNKFLPAEKQVVTANPDINTVELCDEDEFMVLACDGIWDCLSSQQLVDFVHEQLRSETKLSAVCERVFDRCLAPSTAGGEGCDNMTMILVQFKKPAQSSAPAQDQSSSKEQAESQVEPKEV 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01464 358 Pfam Protein phosphatase 2C 23 104 IPR001932 -
Vivi3g01464 358 Pfam Protein phosphatase 2C 156 313 IPR001932 -
Vivi3g01464 358 MobiDBLite consensus disorder prediction 332 349 - -
Vivi3g01464 358 ProSitePatterns PPM-type phosphatase domain signature. 52 60 IPR000222 GO:0043169
Vivi3g01464 358 CDD PP2Cc 23 329 IPR001932 -
Vivi3g01464 358 PANTHER PROTEIN PHOSPHATASE 2C 20 328 IPR015655 GO:0004722|GO:0006470
Vivi3g01464 358 SUPERFAMILY PP2C-like 3 331 IPR036457 -
Vivi3g01464 358 SMART PP2C_4 13 327 IPR001932 -
Vivi3g01464 358 MobiDBLite consensus disorder prediction 332 358 - -
Vivi3g01464 358 SMART PP2C_SIG_2 28 329 IPR001932 -
Vivi3g01464 358 ProSiteProfiles PPM-type phosphatase domain profile. 23 329 IPR001932 -
Vivi3g01464 358 Gene3D - 1 330 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01464 Vivi-Chr3 24210718 24214688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01464 1 341 PP2C-type Phosphatase Gene Family AT2G25070 76.540 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01464 K17499 - gmx:100787778 632.098