Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01461 ATGGTTGCTTCCTCCAGAACTGTTTCTCCTTCTATACTGTTCATGTTCTTTCTCTTTGGCCTCTCTGCAGCTACAGACCTATTGGTTGGAGGCAAGGAAAATGCATGGAAGGTTCCATCTTCTGAAGCAGACTCACTCAATAAATGGGCTGGGAAATCCCGTTTCAATGTCGGCGATCATCTTGTCTGGAAATATGATGGTGGGAAAGACTCAGTTTTGCAAGTAAACAAAGAAGATTATGCTAACTGCAACAGCTCAAACCCCATTCAACAGTACAATGATGGGAACACTAAGGTAAAGCTAGACCGTCCTGGACCATTCTACTTCATCAGTGGAGCTAAGGGTCATTGTGAGAAGGGACAAAAGCTGGTTGTGGTGGTTATTACTCCAAGGACAAGATACGGTCCAGTTTCCCCTGCACCTTCTCCAGCACCCTCTTCAGCAGAGTTAGAAGGAGGTCCAGCTGTTGCTCCAGCTCCAACTAGCAGTGCATCAGTTTTGCAAACTGGTTTTGTGACTGCTCTGGGACTGTTAGCTACTATTTCTGTTGGTTTTCTCATGTGA 564 0.4557 MVASSRTVSPSILFMFFLFGLSAATDLLVGGKENAWKVPSSEADSLNKWAGKSRFNVGDHLVWKYDGGKDSVLQVNKEDYANCNSSNPIQQYNDGNTKVKLDRPGPFYFISGAKGHCEKGQKLVVVVITPRTRYGPVSPAPSPAPSSAELEGGPAVAPAPTSSASVLQTGFVTALGLLATISVGFLM 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01461 187 Pfam Plastocyanin-like domain 36 121 IPR003245 GO:0009055
Vivi3g01461 187 FunFam Early nodulin-like protein 1 24 132 - -
Vivi3g01461 187 ProSiteProfiles Phytocyanin domain profile. 25 129 IPR003245 GO:0009055
Vivi3g01461 187 SUPERFAMILY Cupredoxins 24 128 IPR008972 -
Vivi3g01461 187 MobiDBLite consensus disorder prediction 135 159 - -
Vivi3g01461 187 CDD OsENODL1_like 25 128 IPR041846 -
Vivi3g01461 187 PANTHER BLUE COPPER PROTEIN 26 148 IPR039391 GO:0009055
Vivi3g01461 187 Gene3D - 23 131 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01461 Vivi-Chr3 24198437 24199297 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01461 11 185 Phytocyanin Superfamily AT2G25060 54.857 2.95e-62 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01461 - - tpra:123897354 257.684
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01461 3 24198437 24199297 Vivi3g01461 3 24198437 24199297 ECH
Vivi3g01502 3 24739155 24740097 Vivi3g01461 3 24198437 24199297 PCT