Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01455 ATGGAACCAACGTGCGTTGATACTTCTCTTAACCTCAACCTTGTCCCTTCTCAAGACACAGATGTTGCTATGGTTGCTAAGGTTTTGGTGGAAGAGCTGGAGCGTCTAAGTAATGAGAATAAGAAGTTAACTGAGAGGTTAAACCTCATGTGCGACAATTATATTGCGTTGCAGAAGCATTTAAACGAGTTCAAGAGTCAAGAACCAGTGACCACGCCATCGAGGAAGAGAAAGCTCGAGTGCATTGAAAATTGCACTACAACTGCTAAGGAAGAAACATTCCAACAACACAACTCTTCTCCGAAAATTTCTAAGGTTCTTGTTCGAACAGATGCATCCAACCCTAGCTTATATGTGAGAGATGGATATCAGTGGAGAAAATATGGTCAGAAAGTTACAAGGGATAATCCATCTCCTAGGGCTTACTTCAAGTGCTCTTTTGCTCCATGCTGTCCTGTGAAGAAGAAGGTGCAGAGAAGTGTAGAAGATCCAAACGTGTTAGTGACAACATACGAAGGAGAGCACAACCATGCACATCACCAGCAAGCACAAACATCGTCAAACCAAAGTGAGGCCTCTACGTATAATTCTGTTCCTTCTCCATTAGCTTCAACGCATGACTTGGTCTTGCCAAGCAAAGTAGTAGTTGACAATGGTGTTCAAAGGTCGTCTATACACCAGCTGTTAGTTCAGCAACTGACAGCTTCTTTGACAAGAGATCATAATTTTAGGACAGCACTTGCCACGGCAATTTCTGGAACAAGTTTCGATGTGGAAAAACATTGA 786 0.4249 MEPTCVDTSLNLNLVPSQDTDVAMVAKVLVEELERLSNENKKLTERLNLMCDNYIALQKHLNEFKSQEPVTTPSRKRKLECIENCTTTAKEETFQQHNSSPKISKVLVRTDASNPSLYVRDGYQWRKYGQKVTRDNPSPRAYFKCSFAPCCPVKKKVQRSVEDPNVLVTTYEGEHNHAHHQQAQTSSNQSEASTYNSVPSPLASTHDLVLPSKVVVDNGVQRSSIHQLLVQQLTASLTRDHNFRTALATAISGTSFDVEKH 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01455 261 SUPERFAMILY WRKY DNA-binding domain 117 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g01455 261 Coils Coil 26 53 - -
Vivi3g01455 261 Gene3D WRKY domain 102 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi3g01455 261 MobiDBLite consensus disorder prediction 180 201 - -
Vivi3g01455 261 FunFam WRKY transcription factor 40 104 181 - -
Vivi3g01455 261 SMART WRKY_cls 119 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g01455 261 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 26 253 IPR044810 GO:0003700
Vivi3g01455 261 ProSiteProfiles WRKY domain profile. 114 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi3g01455 261 MobiDBLite consensus disorder prediction 175 201 - -
Vivi3g01455 261 Pfam WRKY DNA -binding domain 121 177 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01455 Vivi-Chr3 23977430 23978752 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01455 6 256 WRKY Transcription Factor Family AT1G80840 42.123 3.77e-63 198
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi3g01455 WRKY 1.8e-23 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01455 - - gmx:100127373 287.345
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01491 3 24654128 24655506 Vivi3g01455 3 23977430 23978752 PCT