Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01407 ATGGCTGATATGCTAGGCTCACTTGTCTCTGCTATCTTGCAAGTACTATTGGATAGGATAGCTAATCGTGAACTCATAGACTTCTTTAGGGGAAATCATCTTGATGAGGCACTTCTACACAAGTTGAAGATGCTTTTGCTGTCTGTCAATACAGTCCTTAATGATGCTGAGGACAAACAGTTTTTTGATCCATTGATCAAGGACTGGGTTGATAGGCTTAAGAATGCTGCTTATGATGCTGATGATGTATTGGATGAAATTGCCACCAAAGCCATGCAAGACAAGATGAATCAAGGGTTCCACACGACCTTAGACCAGGTAAAAGATTATGCTTCGTCTCTCAATCCTTTTTCCGAACGAGTTCAATCTAAAATTGGTAGGATAGTTGAGAGGTTGAAGTCTATTATAGAGCATAAAAATCTTCTCGGACTTAAGGAAATAGGCCTAGGTAAATCACTCTCGTTAGCTTCGGCCACAACTTCTTTGGTGGATGAACATCGTGTGTATGGTAGAAATGGCGATAGGGAGAAGATTATTGAATTTTTGTTAGCTGAAAATTCCAATGGAGAGGGGGTGCCTGTAGTTGCGGTTGTTGGGATGGGCGGAATAGGTAAGACGACTCTTGCTCAAATCTTGTACAATGATGAACGGGTGATGGACCATTTTCAATCTAGATCATGGGCGTCTGTTTCAGAGACTTCAAATGTGTATGAAATAACAAAGAAAGTTTTTGAGTCCTTCACTTTGTCTCATTCTAATATCTCAGACTTGAATATACTCCAAATCAAACTTAAGGATAGATTGACAAGACAGAGGTTTCTAATTGTTTTGGATGGGTTTTGGAATGAGAACTTTCTTGACTGGGACATCCTCCAAAGACCCTTTCTATCAGGAAATTATGGGAGTAGAATCATTATCACCACACGTAATCAAAGTGTTGCAACATTAATCCGTGCGGATTTAACTCATTCCCTCTCGTTTCTATCTCACGAAGATACCTGGAAATTATTCACGAGCCATGCATTCAAATCAGGGAACCCGAATGAGCATCCCATCTTGGCACAAATTGGCCAAAAAATTGTAAAAAAGTGCAATGGTCTCCCTCTAGCTGCAAAAGCTTTAGGGAGTCTTCTGCGTACAAAAGAAGATGTCGAGGAGTGGGAAGGTATATGTTATAGTAGGATATGGGAGCTGCCTAGTGATAAGTGTAGCATTCTTCCTCCTTTAAGATTGAGCTACATTCACTTACCGTCTCATTTAAAGCGATGCTTTACTTATTGTTCCATATTTCCTAAAGGATTTGAAATAAAAAAGTGGAGCTTGATCTATTTATGGATGGCTGAAGGTATACTACCACAACAAAGAGCAGAGAAGAGAATGGAAGATGTAGGAGAAGAATGCTTTCAAGAGTTACTATCTAGGTCATTCTTTTACCCCTCAATTTACAATGTCTCACATTATATGATGCACGATCTTATCCACGACGTATCACAGTTTGTTGCAGGAGAACTCTATTACAACTTAGATGACAACAACCCAAGAATCATCACGAGCAGTGTTCGTCATTTATCCTATTTACAAGGCATATATGATGATCCTGAGAAGTTTGAGATCTTCTCTGAATTTAAGCAGCTCAGGACATTCCTACCATTCAAATACTCATACTTTGTTTACTCCTCTTCAATTACTAGCATGGTTTCGATTTTGTTACCAAAATTGAAATGCTTGCGTGTGCTCTCTTTGTCTCATTATCCAATTACAAAGTTGCCAGATTCAATTGGAAACTTGATGAATATGCGGTATTTGGATCTTGCTCACACTGGAATCGAGTGTTTGCCAGACTTTGTTAGCACTATGTATTACTTGGAGACATTGTTGCTGTCTGGTTGTCGTAATCTCACTATGTTACCAGAAAACATGTGCAACCTTGTCAACATGCGCCAACTTGATATTAGTGGAAGCAATGTGACATCGATGCCTGCAAATTTTGGTAAATTGAAGTCTCTTCAAGTGTTGACCAGTTTTGTAGTAGGTTACGAAAGGGGATCAAAAATCAGTGAGTTAGGAGAGCTTTCAGAACTCCGTGGAGCACTTTTGATTTCCGGACTGCAGAATGTTGTTAATCCAACAGAAGCTTCCCGTGCAAGGTTGAGGATGAAGAAACATCTTTATGAACTAGAATTCAAGTGGACAACTACAACTCACGACAAAGAGAGTGAAGCTTCTATACTCAATATGCTAGAGCCACATCAAAGTTTGAAAATACTCACAATTCAAAATTTTGGTGGTGATAAATTTCCGAATTGGTTGGAGAGCTCTTCATTCTCCTGTATGGTGATTCTACATCTTGCTAACTGTGAAAATTCAAAGTCATTGCCATCACTTGGACAATTGTCCTCCCTCACAGAACTCTATATATCAAAAATGAAGAGCATTCAGAAGATTGGTCTAGAATTCTACGGGAATGTAATCGAGCCATTTAGATCATTAAAAATTATGAAGTTAGAGGACATGCCTAACTTGGAAGAATGGTCAACCAACATATCTGAAGAAATTGGGAGATTCCCTTCACTCCTAGAGCTTTACATTGAGCGATGTCCTAAACTGACCGAAATATTACCTGGCCATCTTCCTTCCTTGGAGAAATTAATGATCACTGGATGTCAAGCTCTCACAAATCCAATGCCATGCGTTCCAAGACTGAGAGAATTAGTTCTGACAGGTTGCGATGCTTTGGTATCGTTATCTGAGAAAATGATGCTGGGAAATAAAAGTCTTCAAACCATGACTATAAGCAATTGCTCATCTCTTGTCACCATCCCTATGGATGGCCAACCAAGTACGTTGCGATCTCTTGAAATCAACGAGTGCAGAAATTTACAACTTTTTCACCATCAGAGTTTGACGCGAGAATCTCAATACTATTCTTCCCTTGAAAAACTACACTTGAAATGTTGTTGTGATTCTCTCATCTCATTTCCGTTTTTCCTCTTCCACAAGCTTGAAGATCTATGTCTACAAGATTGTAGAAACCTCCAATTTATTTCACATCCTCCAAACATTCTACCACATTTTCGGAAGTTAAAACTGAAGCAGTGCTCCAAGTTGGTTCAGTTTCCTGAAGGATGGTTGGATGCTCCCAAAATTGTGTCACTTTGTATCAGCAAATGCATTGATCTCTCATCTAAGACGACATGGAATCTTCAAGCAATGACATCTCTAACTTCTCTTCATATCAGTGGACTTCCTAATCTCACTTCCTTGGAGCACACGGGTGTTCAATACCTAACATCTCTAAGAACTTTGAAGATTAAAGCTTGTGCCAGCCTTGGATCTCTTCCTTTAGACACTCTAGTTAACTCCCTTTCCCATCTTACTATAAGATCATGTCCGTTGTTAAAAGTGCTATGTGAAAAGGACACAGGGGAGTACTGGAGCATGGTCTCTCTCATACCCTTCAGAATCATTGAAGACTAG 3477 0.3946 MADMLGSLVSAILQVLLDRIANRELIDFFRGNHLDEALLHKLKMLLLSVNTVLNDAEDKQFFDPLIKDWVDRLKNAAYDADDVLDEIATKAMQDKMNQGFHTTLDQVKDYASSLNPFSERVQSKIGRIVERLKSIIEHKNLLGLKEIGLGKSLSLASATTSLVDEHRVYGRNGDREKIIEFLLAENSNGEGVPVVAVVGMGGIGKTTLAQILYNDERVMDHFQSRSWASVSETSNVYEITKKVFESFTLSHSNISDLNILQIKLKDRLTRQRFLIVLDGFWNENFLDWDILQRPFLSGNYGSRIIITTRNQSVATLIRADLTHSLSFLSHEDTWKLFTSHAFKSGNPNEHPILAQIGQKIVKKCNGLPLAAKALGSLLRTKEDVEEWEGICYSRIWELPSDKCSILPPLRLSYIHLPSHLKRCFTYCSIFPKGFEIKKWSLIYLWMAEGILPQQRAEKRMEDVGEECFQELLSRSFFYPSIYNVSHYMMHDLIHDVSQFVAGELYYNLDDNNPRIITSSVRHLSYLQGIYDDPEKFEIFSEFKQLRTFLPFKYSYFVYSSSITSMVSILLPKLKCLRVLSLSHYPITKLPDSIGNLMNMRYLDLAHTGIECLPDFVSTMYYLETLLLSGCRNLTMLPENMCNLVNMRQLDISGSNVTSMPANFGKLKSLQVLTSFVVGYERGSKISELGELSELRGALLISGLQNVVNPTEASRARLRMKKHLYELEFKWTTTTHDKESEASILNMLEPHQSLKILTIQNFGGDKFPNWLESSSFSCMVILHLANCENSKSLPSLGQLSSLTELYISKMKSIQKIGLEFYGNVIEPFRSLKIMKLEDMPNLEEWSTNISEEIGRFPSLLELYIERCPKLTEILPGHLPSLEKLMITGCQALTNPMPCVPRLRELVLTGCDALVSLSEKMMLGNKSLQTMTISNCSSLVTIPMDGQPSTLRSLEINECRNLQLFHHQSLTRESQYYSSLEKLHLKCCCDSLISFPFFLFHKLEDLCLQDCRNLQFISHPPNILPHFRKLKLKQCSKLVQFPEGWLDAPKIVSLCISKCIDLSSKTTWNLQAMTSLTSLHISGLPNLTSLEHTGVQYLTSLRTLKIKACASLGSLPLDTLVNSLSHLTIRSCPLLKVLCEKDTGEYWSMVSLIPFRIIED 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01407 1158 PRINTS Disease resistance protein signature 194 209 - -
Vivi3g01407 1158 PRINTS Disease resistance protein signature 875 891 - -
Vivi3g01407 1158 PRINTS Disease resistance protein signature 267 281 - -
Vivi3g01407 1158 PRINTS Disease resistance protein signature 364 378 - -
Vivi3g01407 1158 Gene3D - 413 499 IPR036388 -
Vivi3g01407 1158 Gene3D - 17 124 - -
Vivi3g01407 1158 FunFam Probable disease resistance protein At1g61300 154 322 - -
Vivi3g01407 1158 FunFam Probable disease resistance protein At1g63360 413 498 - -
Vivi3g01407 1158 Pfam NB-ARC domain 175 390 IPR002182 GO:0043531
Vivi3g01407 1158 Gene3D - 152 322 IPR027417 -
Vivi3g01407 1158 Gene3D - 327 412 IPR042197 -
Vivi3g01407 1158 Gene3D Ribonuclease Inhibitor 555 711 IPR032675 -
Vivi3g01407 1158 Gene3D Ribonuclease Inhibitor 969 1062 IPR032675 -
Vivi3g01407 1158 Gene3D Ribonuclease Inhibitor 875 968 IPR032675 -
Vivi3g01407 1158 Gene3D Ribonuclease Inhibitor 716 874 IPR032675 -
Vivi3g01407 1158 Gene3D Ribonuclease Inhibitor 1063 1141 IPR032675 -
Vivi3g01407 1158 Pfam Rx N-terminal domain 8 97 IPR041118 -
Vivi3g01407 1158 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 427 IPR027417 -
Vivi3g01407 1158 SUPERFAMILY RNI-like 849 1131 - -
Vivi3g01407 1158 PANTHER DISEASE RESISTANCE PROTEIN RP 39 866 IPR044974 GO:0006952
Vivi3g01407 1158 SUPERFAMILY L domain-like 489 892 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01407 Vivi-Chr3 22943128 22946604 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01407 171 433 WRKY Transcription Factor Family AT5G45050 25.632 2.56e-10 63.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01407 - - tpra:123923423 1853.18