Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01394 ATGTTTGCTGAAGAAAATGGTCTCAAAGGTGACCCTAGATTGCAACACATCTCTCAATCCATCAGAGTTGTCCCTCACTTCCCCAAAAATGGAATAATGTTTCAAGACATAACGACATTGTTGTTGGATCACAAGGCGTTTAAAGATACTGTCGATATTTTTGTCGATCGTTACAGAGACATGCACATTTCAGTTGTTGCTGGAATTGAAGCACGAGGTTTTGTGTTTGGTTCCTCTGTTGCGTTAGGTATTGGTGCAAAGTTTGTTCCTTTACGCAAACCTCGGAAACTGCCTGGTGAGGTAATTTATGAAAAATATTCTCTAGAATATGGAACTGATTGTCTGGAAATGCATGTTGGCGCTGTGGAAACCGGTGAACGTGCTATAGTTATCGATGATTTGGTTGCAACAGGTGGAACTTTGTCAGCAGGAATAAGACTTTTAGAACGTGCTGGTGCTGAAGTAGTGGAATGTGCCTGTGTAATTGGTGTGCCTGAGGTTAAGGGACGGTGCAAACTTCTTGGAAAACCACTTTATGTCCTGGTGGAGCCACGTCAAGTAGATCAATGTTTTTGA 576 0.4201 MFAEENGLKGDPRLQHISQSIRVVPHFPKNGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMHISVVAGIEARGFVFGSSVALGIGAKFVPLRKPRKLPGEVIYEKYSLEYGTDCLEMHVGAVETGERAIVIDDLVATGGTLSAGIRLLERAGAEVVECACVIGVPEVKGRCKLLGKPLYVLVEPRQVDQCF 191
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01394 191 NCBIfam adenine phosphoribosyltransferase 18 182 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vivi3g01394 191 SUPERFAMILY PRTase-like 19 177 IPR029057 -
Vivi3g01394 191 CDD PRTases_typeI 51 183 IPR000836 -
Vivi3g01394 191 FunFam Adenine phosphoribosyltransferase 1 5 184 - -
Vivi3g01394 191 Hamap Adenine phosphoribosyltransferase [apt]. 17 184 IPR005764 GO:0003999|GO:0005737|GO:0006168
Vivi3g01394 191 Gene3D - 6 184 IPR029057 -
Vivi3g01394 191 PANTHER ADENINE PHOSPHORIBOSYLTRANSFERASE 9 185 - -
Vivi3g01394 191 Pfam Phosphoribosyl transferase domain 43 165 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01394 Vivi-Chr3 22716499 22718977 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01394 11 183 PRT Gene Family AT1G27450 71.676 2.56e-90 260
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01394 K00759 - gmx:100499904 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01394 3 22716499 22718977 Vivi3g01394 3 22716499 22718977 ECH
Vivi3g01394 3 22716499 22718977 Vivi3g01394 3 22716499 22718977 PCT