Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01384 ATGTCGAATCACTGTTTATCAAGTGCTCATTTCCTCACTTTCGGAGCAACCCGCTCCTTTCCCTCGCAACGAAAACCACTTCTCTTCTCCGTCACTCTCTCTCCTCGCTCTCGAAACCTCCACTCCTCAATCGTCACCGCCACTTCCAAAAAGAAAAACAAGAAAAAATTGACTCCTGTTACGGAGGAGAACGAAGAGGAGGAGGATGCATTTGAACTGCTCTTCAAGCAACTTGAAGAAGATCTCAAAAAGGATGATTCATCAATGGATGATTTCGGTGATGAAATATCGGAAGAGGATATGGCTTTGTTGGAACGTGAGTTGGAAGGTGTGTTAGGTGATTTTGATGGTGAATTGTTGAACTCGGATACTGCGGAAACACCGGCTGCTAATGAGGCTGAAAAAACCAGCAAGCTTGGAAATGATGACTTGTTGAACCTTAGAACTTGGCAATTGAATAAGTTGGCTAGAGCTTTAAAAACTGGACGCCGAAAACTGAGTATAAAAACTCTTTCTGCTGAGCTTTGTCTTGATAGAGCTCTAGTTCTTAATTTGCTGCGTAATCCTCCTCCAAATCTTCTGATGATGAGCTTATCGATACCTGATGAACCCACACCATCAGCAATATCTACGCCAGGAGAGAATTTTTATCAAGAAACAAGTGCAGATAATGCAGAATCTGAACCCAAGTCTAACATACCTATTCATACCATGCAAGAGAATTGGTCTTCTCGAAAGAGATTGAAAAAGGCCCACCTTGACACTCTGGAGAGAGTTTACATGAGATCAAAACGGCCCACTAATGCAATGATTAGTAATATTGTGCAAGTTACAAACCTTCCGCGGAAAACAGTAATCAAGTGGTTTGAAGACAAACGCGCCGAGGATGGAGTTCCAAAACAGCGCCTTCCTTACCAGCTCTCAACTAATGAAACTGATTGA 942 0.4257 MSNHCLSSAHFLTFGATRSFPSQRKPLLFSVTLSPRSRNLHSSIVTATSKKKNKKKLTPVTEENEEEEDAFELLFKQLEEDLKKDDSSMDDFGDEISEEDMALLERELEGVLGDFDGELLNSDTAETPAANEAEKTSKLGNDDLLNLRTWQLNKLARALKTGRRKLSIKTLSAELCLDRALVLNLLRNPPPNLLMMSLSIPDEPTPSAISTPGENFYQETSADNAESEPKSNIPIHTMQENWSSRKRLKKAHLDTLERVYMRSKRPTNAMISNIVQVTNLPRKTVIKWFEDKRAEDGVPKQRLPYQLSTNETD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01384 313 Gene3D - 240 303 - -
Vivi3g01384 313 SUPERFAMILY Homeodomain-like 241 308 IPR009057 -
Vivi3g01384 313 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 41 306 - -
Vivi3g01384 313 Pfam Homeodomain 244 294 IPR001356 GO:0003677
Vivi3g01384 313 SMART HOX_1 241 303 IPR001356 GO:0003677
Vivi3g01384 313 MobiDBLite consensus disorder prediction 117 137 - -
Vivi3g01384 313 ProSiteProfiles 'Homeobox' domain profile. 239 299 IPR001356 GO:0003677
Vivi3g01384 313 CDD homeodomain 242 294 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01384 Vivi-Chr3 22575916 22579407 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Vivi3g01384 Homeodomain 3.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01384 - - gmx:100784216 348.206