Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01371 ATGCCTCAGCTGCTACATGGGATGCTTAGAGTAACCATAGGTGAAGTTGACAGGTTGCAATCCGGAATTAGTTTGGCTTTTTGTCACAAGGGCACAACACACAAGGGGAAGAGAATTCTGGCCCAAGTCAAAGGTTGTCTCTTGTGCCGGCCTGAGATTGTTGGAACAAGACTCTATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGACGAACGAGAATGATAGGGAACCAACCTTCAAATCCCAAATGGAACGAAACCTTTGAAATTTATTGTGCTCATTACATATCAAACCTTGTATTCACTGTCAAAGATGATAATCCAATTGGAGCAACTCTAATTGGAAGAGCTTACATCCCTACCCAAAAAGTTCTCAAAGGACATATAACTGACAGATGGCTTGAGATATTAGACGAAGAAGATCATCGCCCTGTACCAGGTGGTCCTAAAATTCGTGTTAGTATGCATTTCATTAGTGTCACTGAGGACAGCACATGTCTTTGGTCTCAGGGAATACACCTGCCATTTTTGGGAGTTCCGCGAATATTTTTCAACCAAAGACAGGGTTGTAGTGTAACTTTATACCAAGATGCTCATGTTCCTGATAGTATTGATAGTATTTATCCGTGGATTCCGATATCTGGAACAAAATCTTATGTTCCTGGAAGATGCTGGGAAGATATTTACAATGCAATTATGGATGCTAAACACTTTATTTACATAACAGGTTGGTCTGTTCATACTGAAATAACCTTGATTAGGGACCCAAAAAAGTCAACAGAAACTAGAGTCACACTTGGAGAAATGCTAAAGAGAAAAGCCGATGAAGGTGTTAATGTTCTTATCCTTGTTTGGGATGACAGAACCTCTGTTCCAGGTTTCAAGGAGGACGGTTTGATGGGAACACATGATCAAGAAACTGCATATTACTTTAGAAACACAAAGGTACATTGCGTTTTATGTCCGCGTAATCCTGATGGTGGACGAAGCATAGTTCAAGGTTTTCAGATTTCAACAATGTTTACTCATCACCAGAAGACTATAATTGTTGATGGTCAACATGTTGAAGGTCATCATGTTGATGGTCAAGATGTAGATGGTCATCTTGTTGATGGTCATCATGTTGAAGGATCAAAGAAGCGAACCGTTATCAGTTTCGTAGGCGGACTCGATCTATGTGATGGGAGATATGATACCATGGAACACCCTTTGTTTTCAACATTGAATACAGTTCATCATGATGATTTTCATCAGCCTAATTTCCCAGGTGCTTCTATTAAGAAAGGCGGTCCTAGAGAACCATGGCATGATATTCATTGTAAGCTAGAAGGACCTGTTGCATGGGATGTGTTGTACAATTTTGAGCAAAGATGGGAAAAGCAAGTTGGGAAGAAATTCCTATTACCAATTGAATTTCTTGATAGAATTCTAATCCATCCTTCTGATGCAATGATATCGGAAAAAGATGGAGACACTTGGAGTGTTCAGTTGTTTAGGTCCATTGATGGTGGTGCTGTTTCTCACTTCCCTCAAGCACCAAATGAAGCTATTGAATTAGGACTTGTTAGTGGAAAAGATAACATCATTGATAGAAGCATTCAGGATGCCTACATAAACGCTATTCGACGAGCCAAAAACTTCATCTACATTGAAAATCAGTATTTCCTAGGGAGTTCTTATGGTTGGAAATCATCTGATATAAAAGTTGAAGACATCGGCGCTTTGCATCTCATACCAAAGGAACTGTCATTGAAGATTGTTAGTAAGATCGAAGCGGGAGAGAGGTTTGTTGTGTATGTGGTGATACCAATGTGGCCAGAAGGTATACCTGAAAGTGCATCAGTACAGGCGATATTGGACTGGCAAAGAAGGACCATGGAGATGATGTATTCTGATATCGCTGATGCCATAAAAAAGAAGAATATCGAAGCTCACCCTCACCCTCGTGAGTATTTGACATTTTATTGCCTTGGCAAAAGGGAGAGTAAGAAAGATGGAGAGTATACTCCTCCAGAGGAACCAAAGCCTAACACTGACTATCATCGCGCACAGAAGTCGAGAAGGTTCATGATCTATGTTCATTCCAAGATGATGATAGTGGATGATGAATACATACTGATTGGTTCAGCAAACATAAACCAAAGATCAATGGATGGTGGAAGAGACACCGAGATAGCAATGGGAGCATTCCAACCGCATCATCTAGCATCGATTGGGCCACAAAGACCACAAGGTCAAATCTACGGGTTCAGAAGAGCATTATGGTATGAACATATTGGTGGTAACAATGATGATTTTGATGAACCTGAAAGTTTGGATTGTGTGAGACTTGTGAACCGCGTTGCTGAGAGAAACTGGAAGTTATACTGTGACGATACATTGGATGAAAGTGAAACTACTCATCTTTTGAGGTATCCTGTTGAAGTGGGAGAAGATGGAAGTGTAACATCAATTCCAGGGATGCAGTATTTTCCTGATACTAAGGCTTTGATTGTTGGTTCGAAATCTGAATTGCTTCCTCCAATTCTTACCACTTAG 2538 0.4043 MPQLLHGMLRVTIGEVDRLQSGISLAFCHKGTTHKGKRILAQVKGCLLCRPEIVGTRLYATVDLDKARVGRTRMIGNQPSNPKWNETFEIYCAHYISNLVFTVKDDNPIGATLIGRAYIPTQKVLKGHITDRWLEILDEEDHRPVPGGPKIRVSMHFISVTEDSTCLWSQGIHLPFLGVPRIFFNQRQGCSVTLYQDAHVPDSIDSIYPWIPISGTKSYVPGRCWEDIYNAIMDAKHFIYITGWSVHTEITLIRDPKKSTETRVTLGEMLKRKADEGVNVLILVWDDRTSVPGFKEDGLMGTHDQETAYYFRNTKVHCVLCPRNPDGGRSIVQGFQISTMFTHHQKTIIVDGQHVEGHHVDGQDVDGHLVDGHHVEGSKKRTVISFVGGLDLCDGRYDTMEHPLFSTLNTVHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGPVAWDVLYNFEQRWEKQVGKKFLLPIEFLDRILIHPSDAMISEKDGDTWSVQLFRSIDGGAVSHFPQAPNEAIELGLVSGKDNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSSDIKVEDIGALHLIPKELSLKIVSKIEAGERFVVYVVIPMWPEGIPESASVQAILDWQRRTMEMMYSDIADAIKKKNIEAHPHPREYLTFYCLGKRESKKDGEYTPPEEPKPNTDYHRAQKSRRFMIYVHSKMMIVDDEYILIGSANINQRSMDGGRDTEIAMGAFQPHHLASIGPQRPQGQIYGFRRALWYEHIGGNNDDFDEPESLDCVRLVNRVAERNWKLYCDDTLDESETTHLLRYPVEVGEDGSVTSIPGMQYFPDTKALIVGSKSELLPPILTT 845
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01371 845 Pfam C2 domain 46 135 IPR000008 -
Vivi3g01371 845 PIRSF PLD_plant 1 845 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vivi3g01371 845 Gene3D Endonuclease Chain A 215 469 - -
Vivi3g01371 845 SMART pld_4 339 396 IPR001736 GO:0003824
Vivi3g01371 845 SMART pld_4 689 716 IPR001736 GO:0003824
Vivi3g01371 845 SUPERFAMILY Phospholipase D/nuclease 521 773 - -
Vivi3g01371 845 Gene3D Endonuclease Chain A 500 736 - -
Vivi3g01371 845 Gene3D C2 domain 6 169 IPR035892 -
Vivi3g01371 845 SUPERFAMILY Phospholipase D/nuclease 179 468 - -
Vivi3g01371 845 PANTHER PHOSPHOLIPASE D 4 833 IPR015679 -
Vivi3g01371 845 FunFam Phospholipase D 500 735 - -
Vivi3g01371 845 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 689 716 IPR001736 GO:0003824
Vivi3g01371 845 SMART C2_3c 8 133 IPR000008 -
Vivi3g01371 845 CDD C2_plant_PLD 1 158 - -
Vivi3g01371 845 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 159 IPR035892 -
Vivi3g01371 845 ProSiteProfiles C2 domain profile. 1 134 IPR000008 -
Vivi3g01371 845 FunFam Phospholipase D delta 215 474 - -
Vivi3g01371 845 Pfam Phospholipase D C terminal 764 835 IPR024632 -
Vivi3g01371 845 Pfam Phospholipase D Active site motif 339 396 IPR001736 GO:0003824
Vivi3g01371 845 Pfam Phospholipase D Active site motif 690 716 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01371 Vivi-Chr3 22362108 22365639 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01371 4 845 Phospholipase D Gene Family (Wang group) AT3G15730 60.870 0.0 1043
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01371 K01115 - gmx:100794115 1230.31