Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01370 ATGGTGTTGCACTTGCTGCATGGGAAGCTTGATGTCTCTATATATGAGGTCGATTCATTACAAACACTTCGAGGATTCAGTTTCGATATCGGCAACAAGGGAGCATATACAAGCATGGGGAAGAAAATTCTGTCACGGCTCAAAAATTGCATTATGTGTCAATGCCAATTCCAGCCTGAGAAAATTATTGGGATGGGTCTATATGCAACAGTTGATTTAGACAAAGCAAGAGTTGGAAGAACTAGGATGATAAATAACCAACCTTTCAACCCTAAATGGAATGAAAACTTTCATATCTACTCAGCTCATTCAATCTCCAATATTATATTCACTGTCAAACAAGATAATCCTATTGGTGCAACTCTAATAGGAAGAGCCTATGTTCCAGTTGAACAAGTCATAAATGGAAAGACAGTAGACACATGGGCTCAAATACTAGATGTGAATCAAAAGCCAATACAAGGTGGTTCCAAAATCCATGTCCAAATAAAATTCTCACATGTTAAGAATGATCCAAACTGGTCACAAGGACTAAAGAGTCCAACATTTCAAGGGGTTCCTCACACTTTCTTTAAGCAAAATAGTGGCTGTCAAATCACTCTTTACCAAGATGCTCATGTTCTAGATGATTCTCTTCCGTCTATTCCGTTAGACGGAGGAGAACGTTACGTGCCAGGGAAATGTTGGGAAGATGTTTACAATGCTATTAATGATGCTAAGCATTTTATTTGCATAACTGGTTGGTCTGTTTACACTGAGATAACATTGATAAGGGATCCAAACAAGTCAACAAGAACAAGCATCACACTTGGAGAGCTTCTCAAGAAGAAAGCTAATGAAGGTGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACTTCTGTTCCAGATTTTAAGAAAGATGGTTTGATGGCAACTCATGATCAAGAAACTAATCAGTATTTCAAAAACACAAATGTGCATTGTGTTTTGTGTCCACGGAACCCCGGTGTTGGAAGAAGTATAGTTCAAGGTTTTGAAACTTCAACAATGTTCACTCATCATCAGAAGACTATAATTGTTGACAGTAGAGTTGTTGGTTCTGATCAATGGAATAAGAGAGCAATCATTAGTTTTGTTGGTGGGATTGATCTTTGTGATGGAAGATATGATACCATGGAACATCCTTTGTTTTCAACTTTGAATACAGTTCATCATGATGATTTTCATCAACCGAATTTCCCCGGTGCTTCGATTAACAAAGGCGGTCCGAGAGAGCCATGGCATGATATTCACTGTAAGCTGGAAGGATCTGTTGCATGGGATGTGTTGAGCAATTTTGAGCAAAGATGGGAGAAGCAAGTTGGGAGGCAATTAGTTCCACTACCTTCAAGCATGCTTGGTGAATACGGTATTACTCGTGGATCGAATGTTGCGACGATGAATGAAAACAAGACATGGAATGTTCAGTTGTTTAGATCGATTGACGATGGTGCTGCTTCCGGCTTCCCTCAAGATCCAAGAGAAGCTTGTGAAAAAGGTCTTGTTAGTGGAAAAGACAGCATCATTGATAGAAGCATTCAAGACGCGTACATAAACGCTATTCGACGAGCGAAAAACTTCATCTACATTGAAAATCAGTATTTTCTAGGCAGTTCATATGGTTGGAAATCATCTGATATAAAAGTTGAAGACATCGGCGCTTTGCATCTCATACCAAAGGAACTCTCATTGAAGATTGTTAGCAAGATTGAAGCAGGAGAGAGATTTTCTGTGTACATTGTAATTCCAATGTGGCCAGAAGGTGTACCTGAAAGTGCTTCAGTTCAAGCTATACTAGATTGGCAAAGAAGGACTATGGAGATGATGTATTCTGACATAGCTGAAGCTCTTCAAAGAAAAGGAATCAGAGCCAATCCAAGAGATTACTTGACTTTCTTTTGCCTCGGAAATCGAGAAGAGAAGAAAATGAATGAATATAGTCCTACAGAAACACCAGAACCAGACAGTGATTATAGTAGAGCACAAAATTCTAGGAGATTCATGATATATGTTCATGCCAAAATGATGATAGTTGATGATGAGTACATAATCATTGGTTCTGCAAACATAAACCAAAGATCAATGGATGGTGCAAGAGACAGTGAGATTGCAATAGGTGCATTTCAACCAGGCCACATAGCAACCAATAATAGGCCACCAAAAGGACAAATCTATGCATTTAGACGTTCACTATGGTATGAGCACCTTGGAGATGTAGGTAACACAAGTTTCTTTGATAATCCAGAAAGTTTGAACTGCATCAAACTTGTGAATAGTTGTGCTGAGACCAATTGGGATGTATACTCAAGAGATGCATTTGATGAACACATAACATTTCATCACCTCATGAGATATCCAATACAAGTAGCTAATAATGGAGCCATAACAACTCTTGCAGGATTTGAATATTTTCCTGATACTAAGGCTAGGATTTTAGGTACTAAGTCTGAGTATCTTCCTCCAATTCTCACCACTTAA 2499 0.3862 MVLHLLHGKLDVSIYEVDSLQTLRGFSFDIGNKGAYTSMGKKILSRLKNCIMCQCQFQPEKIIGMGLYATVDLDKARVGRTRMINNQPFNPKWNENFHIYSAHSISNIIFTVKQDNPIGATLIGRAYVPVEQVINGKTVDTWAQILDVNQKPIQGGSKIHVQIKFSHVKNDPNWSQGLKSPTFQGVPHTFFKQNSGCQITLYQDAHVLDDSLPSIPLDGGERYVPGKCWEDVYNAINDAKHFICITGWSVYTEITLIRDPNKSTRTSITLGELLKKKANEGVNVLMLVWDDRTSVPDFKKDGLMATHDQETNQYFKNTNVHCVLCPRNPGVGRSIVQGFETSTMFTHHQKTIIVDSRVVGSDQWNKRAIISFVGGIDLCDGRYDTMEHPLFSTLNTVHHDDFHQPNFPGASINKGGPREPWHDIHCKLEGSVAWDVLSNFEQRWEKQVGRQLVPLPSSMLGEYGITRGSNVATMNENKTWNVQLFRSIDDGAASGFPQDPREACEKGLVSGKDSIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKSSDIKVEDIGALHLIPKELSLKIVSKIEAGERFSVYIVIPMWPEGVPESASVQAILDWQRRTMEMMYSDIAEALQRKGIRANPRDYLTFFCLGNREEKKMNEYSPTETPEPDSDYSRAQNSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAIGAFQPGHIATNNRPPKGQIYAFRRSLWYEHLGDVGNTSFFDNPESLNCIKLVNSCAETNWDVYSRDAFDEHITFHHLMRYPIQVANNGAITTLAGFEYFPDTKARILGTKSEYLPPILTT 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01370 832 Gene3D C2 domain 4 169 IPR035892 -
Vivi3g01370 832 Pfam Phospholipase D C terminal 751 822 IPR024632 -
Vivi3g01370 832 SMART pld_4 343 382 IPR001736 GO:0003824
Vivi3g01370 832 SMART pld_4 674 701 IPR001736 GO:0003824
Vivi3g01370 832 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 674 701 IPR001736 GO:0003824
Vivi3g01370 832 SMART C2_3c 47 142 IPR000008 -
Vivi3g01370 832 ProSiteProfiles C2 domain profile. 1 143 IPR000008 -
Vivi3g01370 832 SUPERFAMILY Phospholipase D/nuclease 508 744 - -
Vivi3g01370 832 Pfam C2 domain 10 144 IPR000008 -
Vivi3g01370 832 FunFam Phospholipase D 487 720 - -
Vivi3g01370 832 SUPERFAMILY Phospholipase D/nuclease 171 455 - -
Vivi3g01370 832 PANTHER PHOSPHOLIPASE D 4 820 IPR015679 -
Vivi3g01370 832 Gene3D Endonuclease Chain A 483 717 - -
Vivi3g01370 832 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 64 167 IPR035892 -
Vivi3g01370 832 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 343 382 IPR001736 GO:0003824
Vivi3g01370 832 Gene3D Endonuclease Chain A 220 459 - -
Vivi3g01370 832 FunFam Phospholipase D delta 219 458 - -
Vivi3g01370 832 PIRSF PLD_plant 1 832 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Vivi3g01370 832 CDD C2_plant_PLD 5 165 - -
Vivi3g01370 832 Pfam Phospholipase D Active site motif 675 701 IPR001736 GO:0003824
Vivi3g01370 832 Pfam Phospholipase D Active site motif 343 382 IPR001736 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01370 Vivi-Chr3 22350790 22353845 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01370 1 832 Phospholipase D Gene Family (Wang group) AT3G15730 63.007 0.0 1080
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01370 K01115 - gmx:100791688 1290.4