Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01361 ATGCGTTCAATTGTGACTAACCGTATTGTGCAGTGCTCAATCGCTACCGCACCAGGTGGTGAAACTAATTCTCCCGCCAAATTGCAACCACCCTCTTTCTCAACCCTAAAGTTCCGCTCCGATAGGTCCAACGACCATGCTTCTTCAGGTGATGTAGGGGTTTCGAGTAGTAGGAGAGGTGTAATATGTAGCATCGCCACTTTGCCATGTCTTCTTCCATTCACTCACATCTTTGGTTCTCTCCCGGCCTCCGCCGTGCCGCCGCCGCCATTGGGTGGAGATGAATATGTTCGAATTAAACAAGAGTTGGGGAAGGTATTGTCTAAGGGAAAGGCCGCCGGTGTGCTTCGTTTGGTTTTTCATGATGCTGGAACTTTTGAAATTGATGACAATACAGGTGGCATGAATGGTTCTATAGTCTACGAACTCGAAAGACCTGAAAATGCTGGTCTGAAAAAATCAGTAAAGAAAGCCAAGACTCAGATAGATGCGATCCATCCAGTATCCTGGGCGGACGTTATTGCGGTGGCTGGAGCGGAAGCTGTTGAAGTATGTGGTGGTCCTACTATCCAAGTTTCACTCGGCAGACAAGATTCTCTGGGGCCTGATCCTGAAGGGAAACTTCCTGAAGAAACCCTTGATGCTTCTGGTTTGAAAAGATGCTTCCAGAAAAAAGGCTTCTCAACACAAGAACTGGTAGCTTTGTCTGGAGCTCACACTCTTGGAAGTAAGGGTTTTGGAAGCCCTACTTCTTTTGACAATTCATATTATAAGGTTCTGTTGGAAAAGCCACCAACGCCTTCAGGCGGTATGTCGACTATGATTGGTCTTCCTTCAGATCACGCACTTGTCGAGGATGATGAATGCTTAAGATGGATTAAAAAGTACGCAGACAATGAGGATATGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAGTGGCTTATAA 975 0.4595 MRSIVTNRIVQCSIATAPGGETNSPAKLQPPSFSTLKFRSDRSNDHASSGDVGVSSSRRGVICSIATLPCLLPFTHIFGSLPASAVPPPPLGGDEYVRIKQELGKVLSKGKAAGVLRLVFHDAGTFEIDDNTGGMNGSIVYELERPENAGLKKSVKKAKTQIDAIHPVSWADVIAVAGAEAVEVCGGPTIQVSLGRQDSLGPDPEGKLPEETLDASGLKRCFQKKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPPTPSGGMSTMIGLPSDHALVEDDECLRWIKKYADNEDMFFEDFKNAYVKLVNSGVRWSGL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01361 324 Gene3D - 100 318 - -
Vivi3g01361 324 SUPERFAMILY Heme-dependent peroxidases 110 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 FunFam Adenylate/guanylate cyclase 209 311 - -
Vivi3g01361 324 Gene3D Peroxidase, domain 2 209 311 - -
Vivi3g01361 324 MobiDBLite consensus disorder prediction 20 38 - -
Vivi3g01361 324 Pfam Peroxidase 109 299 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 MobiDBLite consensus disorder prediction 20 55 - -
Vivi3g01361 324 ProSitePatterns Peroxidases proximal heme-ligand signature. 231 241 IPR019793 -
Vivi3g01361 324 PRINTS Plant ascorbate peroxidase signature 225 246 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Plant ascorbate peroxidase signature 130 140 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Plant ascorbate peroxidase signature 167 185 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Plant ascorbate peroxidase signature 207 224 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Plant ascorbate peroxidase signature 186 198 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Plant ascorbate peroxidase signature 112 127 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Plant ascorbate peroxidase signature 295 319 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 FunFam L-ascorbate peroxidase 102 216 - -
Vivi3g01361 324 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 96 321 IPR044831 GO:0004601|GO:0034599
Vivi3g01361 324 PRINTS Haem peroxidase superfamily signature 168 185 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Haem peroxidase superfamily signature 112 126 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Haem peroxidase superfamily signature 186 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 PRINTS Haem peroxidase superfamily signature 231 246 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01361 324 ProSitePatterns Peroxidases active site signature. 112 123 IPR019794 GO:0004601
Vivi3g01361 324 ProSiteProfiles Plant heme peroxidase family profile. 112 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01361 Vivi-Chr3 22150790 22154197 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01361 85 320 Peroxidase AT4G17690 29.236 9.67e-21 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01361 K00434 - gmx:100792735 432.95