Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01349 ATGGCTGTTTTATCAACTTGTTCTCTTTTCATCCTTTTTCTTGTCTTTGCTTTTGCAGCTGCAGCGCCTACGGGTACGGATTACCTCCTTGGTGGCAAACCTGATGCATGGAAAGTTCCTTCTGAATCTGACTCTCTCAACAAATGGGCTGAGAGTGTTCGATTCAACATTGGAGATCATCTCATTTTCACATATGAAGCTGGAAAGGACTCAGTTTTGGAAGTGAGCAAAGAGAATTATATGAGCTGCAACACCTCAGGCGCAATAAAAATGTACAACGATGGAAAAACCAAGGTGAGGTTTGATCTTTCAGGTCCATACTACTTCATCAGTGGAGAAAAGGGTCACTGTGAAAAGGGTGAGAAGGTTACTGTGGTGGTTATCAGTCCAAGAAGTCCAAGAAGTGATGTTCCTGTTTCACCTTCACCTTCACCAGCTGGTGCTAAAGGTCCAGGTCCAGCTGTTGCTCCAAGTCCAAAGAGCAGTGCAAATGTTTTGCAGGGTGGTGGTGTTTTGATGGCAATGGGAGTTGTGGTGGCTGCTATGTGGTTTTTCTGA 558 0.4462 MAVLSTCSLFILFLVFAFAAAAPTGTDYLLGGKPDAWKVPSESDSLNKWAESVRFNIGDHLIFTYEAGKDSVLEVSKENYMSCNTSGAIKMYNDGKTKVRFDLSGPYYFISGEKGHCEKGEKVTVVVISPRSPRSDVPVSPSPSPAGAKGPGPAVAPSPKSSANVLQGGGVLMAMGVVVAAMWFF 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01349 185 FunFam Early nodulin-like protein 1 25 132 - -
Vivi3g01349 185 Pfam Plastocyanin-like domain 37 120 IPR003245 GO:0009055
Vivi3g01349 185 SUPERFAMILY Cupredoxins 25 128 IPR008972 -
Vivi3g01349 185 PANTHER BLUE COPPER PROTEIN 27 144 IPR039391 GO:0009055
Vivi3g01349 185 MobiDBLite consensus disorder prediction 136 152 - -
Vivi3g01349 185 ProSiteProfiles Phytocyanin domain profile. 26 129 IPR003245 GO:0009055
Vivi3g01349 185 MobiDBLite consensus disorder prediction 132 160 - -
Vivi3g01349 185 CDD OsENODL1_like 26 128 IPR041846 -
Vivi3g01349 185 Gene3D - 26 138 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01349 Vivi-Chr3 22004091 22004648 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01349 8 184 Phytocyanin Superfamily AT2G25060 48.045 1.17e-50 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01349 - - gmx:100527928 144.05