Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01344 ATGGTAAAAAAACATTTGTTTTCCTCCTACGTTGTTGTTGTTTTGTCTATCTCAATCCTCTTCATGTCAAAACCATGTTTCTGTGGTATTCAATACATCGGCAAAATCTTACCTGGTACACAAGGTTCACAGATGAATTGGATTGACAGAGAGGGTAAATTCCTCCTCTCAAAAAACCTAAATTTCGCTTTTGGTTTCATGACCACCGTCAACGACTCCACCAAGTTTCTACTAGTAATCCTCCACGTATCAAGCTCCACCGTGATTTGGACTGCAAATAGAGCAAAACCTGTTTCCAATTCTGATAACTTCGTCTTTGATCAAAAAGGAAATGCTTTTTTATCAAAAGATGGTGTTTTGATTTGGTCTACAAACACAATTAACAAAGGGGTTTCTTCAATGGTGTTGCAGGATAATGGAAACTTGGTTTTGCTTGGGGGTGATAATAACAGTACGGTGATTTGGCAGAGTTTTGATTTTCCGACTGATACTTTGTTGCCTCAACAGGTTTTCAAAAAGGGGATGAAGCTTACTAGTGAGCCTGGTTCGAATAGTTTGGTTTATGCTCTTGAGATTGAATCTGGGAATGTTGTTCTTTCTGCTGGGTTTAGAGTACCACAGGTTTATTGGACTATGCAGAAGGATAACCGGAAGACGGTTGATAAGGATGGTGATGTCGTGGTTTCGGCGAATCTTAGTGATAACTCTTGGAGATTTTATGATGAGAAGAAGTCTTTGTTGTGGCAGTTCATATTCTCGGCTGATGCGGGTGATAATGCGACATGGATTGCTGTTTTGGGATGGGATGGTGTTATTAGTTTCAAGAATCTCAACAGTGGTGGATCGGACGGTGATTCTTCGACAAGGATACCGCAGGATCCTTGTGGTACACCGGAGCCTTGTGATCCTTACAGTGTATGCACGGCTAATCGCAGTAGCAGGTGTAGCTGTCTTTCTGTTGTTCCTAGTTGTAAACCTGGTTTTGTTTCTCCTTGTGATGATGGTAAACCAGAAAAATCTGTTGAACTTTTGAAAGGTGATGATGGGATTAGTTACTTTGCTCTTGATTATCTGCAGCCATTTTCGAAAACTGATTTGGCTGGGTGTCAAACTTCGTGTCGTGGTAATTGCTCTTGTCTTGCAATGTTCTTTCATAAGAGTTCAGGAAACTGTTTCCTTCTGGAGAGTGTAGGAAGTTTTCAGAAATCTGGTAATGGTGATTCTGGTTATGTTTCTTACATTAAGGTATCGAGTGATGGAGGCGAAAAAGGAAGTGGAGTTAGACCTACACACATCGTTGTCATTGTTGTTATTGTTGTATTAACTTTGTTTGTGATTTCTGTTCTGATCTTTGTTGGGGTAAGATACTACAGGAAAAAGAAAATGTTACCTGAATCTCCAAGGGAGAATTCAGAAGAGGACAATTTCTTGGAGAATTTAACCGGTATGCCAATACGTTACCGATACAAAGATCTTGAAGTTGCAACTAATAACTTCTCAGTGAAGCTTGGTCAAGGAGGTTTTGGCTCAGTTTATAAAGGAGTTCTACCTGATGGAACTCAATTAGCCGTGAAGCAACTGGAAGGTATTGGTCAAGGGAAGAAAGAGTTCAGAGCCGAAGTTAGCATCATTGGAAGCATTCATCATCTTAATTTGGTAAGGCTTAAAGGCTTTTGCGCAGACGGAACTCATAGGCTTTTAGTTTACGAGTATATGGCAAATAACTCGTTGGATAAATGGATATTCAAGAAGAAAAAAGGCGAATTTCTTTTGGATTGGGATACAAGGTATAACATAGCAGTGGGAACAGCGAAAGGGCTAGCGTATCTGCACGAAGATTGTGACTCAAAGATTGTTCATTGTGACATCAAGCCAGAAAACGTACTTCTCGACGATCATTTCATGGCTAAAGTTTCCGATTTCGGTTTAGCCAAGCTGATGAACCGAGAACAAAGCCATGTCTTCACAACGCTAAGAGGAACACGCGGCTACCTCGCACCAGAGTGGATAACAAACTACGCTATATCAGAGAAAAGCGACGTATACAGCTACGGAATGGTGTTGCTAGAGATTATCGGCGGAAGGAAGAACTACGATACTAACGAGACTTCGGAGAAAAACTATTTCCCGAGTTTCGCTTTCAAGATGATGGAGGAAGGTAAAATGCGAGATATACTCGATTCTGAGCTGCAAATTGATGAGCATGATGATAGGGTGCATTGTGCTATAAGGGTTGCATTGTGGTGTATACAAGAAGACATGTCAATGAGACCATCAATGACAAAGGTTGTTCAAATGTTGGAAGGTCTTTGTACTGTTCCTAAACCACCAACTAGTTCTTATTTGGGTTCTAGACTTTATGCAACTGTGTTTAAATCATCTAGTGAAGGAGGAAATTCTTCTGGTCCATCAGATTGTAATAGTGATGCTTATCTATCTGCAGTTCGTCTTTCTGGCCCCAGATAA 2466 0.4059 MVKKHLFSSYVVVVLSISILFMSKPCFCGIQYIGKILPGTQGSQMNWIDREGKFLLSKNLNFAFGFMTTVNDSTKFLLVILHVSSSTVIWTANRAKPVSNSDNFVFDQKGNAFLSKDGVLIWSTNTINKGVSSMVLQDNGNLVLLGGDNNSTVIWQSFDFPTDTLLPQQVFKKGMKLTSEPGSNSLVYALEIESGNVVLSAGFRVPQVYWTMQKDNRKTVDKDGDVVVSANLSDNSWRFYDEKKSLLWQFIFSADAGDNATWIAVLGWDGVISFKNLNSGGSDGDSSTRIPQDPCGTPEPCDPYSVCTANRSSRCSCLSVVPSCKPGFVSPCDDGKPEKSVELLKGDDGISYFALDYLQPFSKTDLAGCQTSCRGNCSCLAMFFHKSSGNCFLLESVGSFQKSGNGDSGYVSYIKVSSDGGEKGSGVRPTHIVVIVVIVVLTLFVISVLIFVGVRYYRKKKMLPESPRENSEEDNFLENLTGMPIRYRYKDLEVATNNFSVKLGQGGFGSVYKGVLPDGTQLAVKQLEGIGQGKKEFRAEVSIIGSIHHLNLVRLKGFCADGTHRLLVYEYMANNSLDKWIFKKKKGEFLLDWDTRYNIAVGTAKGLAYLHEDCDSKIVHCDIKPENVLLDDHFMAKVSDFGLAKLMNREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRKNYDTNETSEKNYFPSFAFKMMEEGKMRDILDSELQIDEHDDRVHCAIRVALWCIQEDMSMRPSMTKVVQMLEGLCTVPKPPTSSYLGSRLYATVFKSSSEGGNSSGPSDCNSDAYLSAVRLSGPR 821
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01344 821 Pfam D-mannose binding lectin 87 172 IPR001480 -
Vivi3g01344 821 ProSitePatterns Protein kinases ATP-binding region signature. 503 525 IPR017441 GO:0005524
Vivi3g01344 821 SUPERFAMILY Protein kinase-like (PK-like) 478 768 IPR011009 -
Vivi3g01344 821 ProSiteProfiles Bulb-type lectin domain profile. 40 157 IPR001480 -
Vivi3g01344 821 FunFam serine/threonine-protein kinase PBS1-like 465 571 - -
Vivi3g01344 821 CDD STKc_IRAK 503 770 - -
Vivi3g01344 821 Gene3D - 45 159 IPR036426 -
Vivi3g01344 821 CDD B_lectin 52 161 IPR001480 -
Vivi3g01344 821 SUPERFAMILY WD40 repeat-like 116 280 IPR036322 GO:0005515
Vivi3g01344 821 Gene3D Phosphorylase Kinase; domain 1 462 571 - -
Vivi3g01344 821 SUPERFAMILY alpha-D-mannose-specific plant lectins 88 179 IPR036426 -
Vivi3g01344 821 ProSiteProfiles Protein kinase domain profile. 497 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01344 821 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01344 821 FunFam S-receptor-like kinase 5 572 776 - -
Vivi3g01344 821 Gene3D Transferase(Phosphotransferase) domain 1 572 775 - -
Vivi3g01344 821 SMART blect_4 46 161 IPR001480 -
Vivi3g01344 821 Pfam Protein kinase domain 501 765 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01344 821 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 45 778 - -
Vivi3g01344 821 PIRSF SRK 5 817 IPR024171 GO:0004674
Vivi3g01344 821 FunFam Serine/threonine-protein kinase 42 159 - -
Vivi3g01344 821 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01344 Vivi-Chr3 21868726 21871841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01344 439 779 Receptor kinase-like Gene Family AT5G20050 47.383 1.30e-99 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Vivi3g01344 Pkinase 1.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01344 - - tpra:123882999 1268.83