Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01343 ATGCGTTCAATTGTGACTAACCGTATTGTGCAGTGCTCCATCGCTACCGCACCAGGTGGTGAAACTAATTCTCCCGCCAAATTGCAACCACCCTCTTTCTCAACCCTAAAGTTCCGCTCCGATAGGTCCAACGACCATGCTTCTTCAGGTGATGTAGGGGTTTCGAGTAGTAGGAGAGGTGTAATATGCAGCATCGCCACTTTGCCATGTCTTCTTCCATTCACTCACATCTTTGGTTCTCTCCCGGCCTCCGCCGTGCCGCCGCCGCCGCCACCGGGTGGAGATGAATATGTTCGAATTAAACAAGAATTGGGGAAGGTATTGTCAAAGGGAAAGGCCGCCGGTGTGCTTCGTTTGGTTTTTCATGATGCTGGAACTTTTGAAATTGATGACAATACAGGTGGCATGAATGGTTCTATAGTCTACGAACTTGAAAGACCTGAAAATGCTGGTCTGAAAAAATCAGTAAAGGTTCTGCAGAAAGCCAAGACTCAGATAGATGCGATCCATCCAGTATCCTGGGCGGACGTTATTGCGGTGGCTGGAGCGGAAGCTGTTGAAGTATGTGGTGGTCCTACTATCCAAGTTTCGCTCGGAAGACAAGATTCTCTGGGGCCTGATCCTGAAGGGAAACTTCCTGAAGAAACCCTTGATGCTTCTGGTTTGAAAAGATGCTTCCAGAAAAAAGGCTTCTCAACACAAGAACTGGTAGCTTTGTCTGGAGCTCACACTCTTGGAAGTAAGGGTTTTGGAAGCCCTACTTCTTTTGACAATTCGTATTATAAGGTTCTGTTGGAAAAGCCACCAACGCCTTCAGGCGGTATGTCGACTATGATTGGTCTTCCTTCAGATCACGCACTTGTCGAGGATGATGAATGCTTAAGATGGATTAAAAAGTACGCAGACAATGAGGATATGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAGTGGCTTATAA 987 0.465 MRSIVTNRIVQCSIATAPGGETNSPAKLQPPSFSTLKFRSDRSNDHASSGDVGVSSSRRGVICSIATLPCLLPFTHIFGSLPASAVPPPPPPGGDEYVRIKQELGKVLSKGKAAGVLRLVFHDAGTFEIDDNTGGMNGSIVYELERPENAGLKKSVKVLQKAKTQIDAIHPVSWADVIAVAGAEAVEVCGGPTIQVSLGRQDSLGPDPEGKLPEETLDASGLKRCFQKKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPPTPSGGMSTMIGLPSDHALVEDDECLRWIKKYADNEDMFFEDFKNAYVKLVNSGVRWSGL 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01343 328 MobiDBLite consensus disorder prediction 20 38 - -
Vivi3g01343 328 PRINTS Plant ascorbate peroxidase signature 171 189 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Plant ascorbate peroxidase signature 211 228 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Plant ascorbate peroxidase signature 299 323 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Plant ascorbate peroxidase signature 131 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Plant ascorbate peroxidase signature 229 250 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Plant ascorbate peroxidase signature 190 202 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Plant ascorbate peroxidase signature 113 128 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 MobiDBLite consensus disorder prediction 20 55 - -
Vivi3g01343 328 Pfam Peroxidase 110 303 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 ProSiteProfiles Plant heme peroxidase family profile. 113 328 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 ProSitePatterns Peroxidases proximal heme-ligand signature. 235 245 IPR019793 -
Vivi3g01343 328 PRINTS Haem peroxidase superfamily signature 113 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Haem peroxidase superfamily signature 172 189 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Haem peroxidase superfamily signature 235 250 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 PRINTS Haem peroxidase superfamily signature 190 202 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 FunFam Adenylate/guanylate cyclase 213 315 - -
Vivi3g01343 328 ProSitePatterns Peroxidases active site signature. 113 124 IPR019794 GO:0004601
Vivi3g01343 328 Gene3D - 101 322 - -
Vivi3g01343 328 SUPERFAMILY Heme-dependent peroxidases 111 326 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi3g01343 328 Gene3D Peroxidase, domain 2 213 315 - -
Vivi3g01343 328 FunFam L-ascorbate peroxidase 103 220 - -
Vivi3g01343 328 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 97 325 IPR044831 GO:0004601|GO:0034599
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01343 Vivi-Chr3 21864645 21867969 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01343 113 318 Peroxidase AT4G16270 31.439 4.77e-23 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01343 K00434 - gmx:100792735 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01343 3 21864645 21867969 Vivi3g01343 3 21864645 21867969 ECH