Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01342 ATGCGTTCAATTGTGACTAACCGTATTGTGCAGTGCTCCATCGCTACCGCACCAGGTGGTGAAACTAATTCTCCCGCCAAATTGCAACCACCCTCTTTCTCAACCCTAAAGTTCCGCTCCGATAGGTCCAACGACCATGCTTCTTCAGGTGATGTAGGGGTTTCGAGTAGTAGGAGAGGTGTAATATGCAGCATCGCCACTTTGCCATGTCTTCTTCCATTCACTCACATCTTTGGTTCTCTCCCGGCCTCCGCCGTGCCGCCGCCGCCGCCACCGGGTGGAGATGAATATGTTCGAATTAAACAAGAATTGGGGAAGGTATTGTCAAAGGGAAAGGCCGCCGGTGTGCTTCGTTTGGTTTTTCATGATGCTGGAACTTTTGAAATTGATGACAATACAGGTGGCATGAATGGTTCTATAGTCTACGAACTTGAAAGACCTGAAAATGCTGGTCTGAAAAAATCAGTAAAGAAAGCCAAGACTCAGATAGATGCGATCCATCCAGTATCCTGGGCGGACGTTATTGCGGTGGCTGGAGCGGAAGCTGTTGAAGTATGTGGTGGTCCTACTATCCAAGTTTCGCTCGGAAGACAAGATTCTCTGGGGCCTGATCCTGAAGGGAAACTTCCTGAAGAAACCCTTGATGCTTCTGGTTTGAAAAGATGCTTCCAGAAAAAAGGCTTCTCAACACAAGAACTGGTAGCTTTGTCTGGAGCTCACACTCTTGGAAGTAAGGGTTTTGGAAGCCCTACTTCTTTTGACAATTCGTATTATAAGGTTCTGTTGGAAAAGCCACCAACGCCTTCAGGCGGTATGTCGACTATGATTGGTCTTCCTTCAGATCACGCACTTGTCGAGGATGATGAATGCTTAAGATGGATTAAAAAGTACGCAGACAATGAGGATATGTTCTTTGAAGATTTCAAAAATGCGTATGTCAAGCTGGTGAATTCTGGTGTGAGGTGGAGTGGCTTATAA 978 0.4642 MRSIVTNRIVQCSIATAPGGETNSPAKLQPPSFSTLKFRSDRSNDHASSGDVGVSSSRRGVICSIATLPCLLPFTHIFGSLPASAVPPPPPPGGDEYVRIKQELGKVLSKGKAAGVLRLVFHDAGTFEIDDNTGGMNGSIVYELERPENAGLKKSVKKAKTQIDAIHPVSWADVIAVAGAEAVEVCGGPTIQVSLGRQDSLGPDPEGKLPEETLDASGLKRCFQKKGFSTQELVALSGAHTLGSKGFGSPTSFDNSYYKVLLEKPPTPSGGMSTMIGLPSDHALVEDDECLRWIKKYADNEDMFFEDFKNAYVKLVNSGVRWSGL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01342 325 PRINTS Haem peroxidase superfamily signature 187 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Haem peroxidase superfamily signature 169 186 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Haem peroxidase superfamily signature 232 247 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Haem peroxidase superfamily signature 113 127 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 232 242 IPR019793 -
Vivi3g01342 325 FunFam L-ascorbate peroxidase 103 217 - -
Vivi3g01342 325 MobiDBLite consensus disorder prediction 20 38 - -
Vivi3g01342 325 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 97 322 IPR044831 GO:0004601|GO:0034599
Vivi3g01342 325 MobiDBLite consensus disorder prediction 20 55 - -
Vivi3g01342 325 Pfam Peroxidase 110 300 IPR002016 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 Gene3D Peroxidase, domain 2 210 312 - -
Vivi3g01342 325 PRINTS Plant ascorbate peroxidase signature 226 247 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Plant ascorbate peroxidase signature 187 199 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Plant ascorbate peroxidase signature 208 225 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Plant ascorbate peroxidase signature 168 186 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Plant ascorbate peroxidase signature 296 320 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Plant ascorbate peroxidase signature 113 128 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 PRINTS Plant ascorbate peroxidase signature 131 141 IPR002207 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 ProSitePatterns Peroxidases active site signature. 113 124 IPR019794 GO:0004601
Vivi3g01342 325 SUPERFAMILY Heme-dependent peroxidases 111 323 IPR010255 GO:0004601|GO:0006979|GO:0020037
Vivi3g01342 325 Gene3D - 101 319 - -
Vivi3g01342 325 FunFam Adenylate/guanylate cyclase 210 312 - -
Vivi3g01342 325 ProSiteProfiles Plant heme peroxidase family profile. 113 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01342 Vivi-Chr3 21864645 21867975 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01342 113 315 Peroxidase AT4G16270 31.061 1.17e-20 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01342 K00434 - gmx:100792735 431.409