Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01321 ATGTCGAATCACTGTTTATCAAGTGCTCATTTCCTCACTATCGGAGCAACCCGCTCCTTTCCCTCGCAACGAAAACCATTTCTCTTCTCCGTCCCTCTCTCTCCTCGCTCTCGAAACCTCCACTCCTCAATCGTCACCGCCACTCCCAAAAAGAAAAACAAGAAGAAATTGACTCCTGTTACCGAGGAGAACGAAGAGGAGGAGGATGCATTTGAACTGCTCTTCAAGCAACTTGAAGAAGATCTCAAAAAGGACGATTCATCAATGGATGATTTCGGCGATGAAATATCGGAAGAGGATATGGCTTTGTTGGAACGTGAGTTGGAAGGTGTGTTAGGTGATTTTGATGGTGAATTGTTGAACTCGGATACTGCGGAAACACCGGCTGCTAATGAGGCTGAAAAAACCAGCAAGCTTGGAAATGATGACTTGTTGAACCTTAGAACTTGGCAATTGAATAAGTTGGCTAGAGCCTTAAAAACTGGACGCCGAAAACTGAGTATAAAAACTCTTGCTGCTGAGCTTTGTCTTGATAGAGCTCTAGTTCTTAATTTGCTGCGTAATCCTCCTCCAAATCTTCTGATGATGAGCTTATCGATACCTGATGAACCCACACCATCAGCAATATCTACGCCAGGAGAGAATTTTTATCAAGAAACAAGTGCAGATAATGCAGAATCTGAACCCAAGTCTAACATACCTATTCATACCATGCAAGAGAATTGGTCTTCTCGAAAGAGATTGAAAAAGGCCCACCTTGACACTCTGGAGAGAGTTTACATGAGATCAAAACGGCCCACTAATGCAATGATTAGTAATATTGTGCAAGTTACAAATCTTCCGCGGAAAACAGTAATCAAGTGGTTTGAAGACAAACGCGCCGAGGACGGAGTTCCAAAACAGCGCCTTCCTTACCAGCTCTCAACTAATGAAACTGATTGA 942 0.4321 MSNHCLSSAHFLTIGATRSFPSQRKPFLFSVPLSPRSRNLHSSIVTATPKKKNKKKLTPVTEENEEEEDAFELLFKQLEEDLKKDDSSMDDFGDEISEEDMALLERELEGVLGDFDGELLNSDTAETPAANEAEKTSKLGNDDLLNLRTWQLNKLARALKTGRRKLSIKTLAAELCLDRALVLNLLRNPPPNLLMMSLSIPDEPTPSAISTPGENFYQETSADNAESEPKSNIPIHTMQENWSSRKRLKKAHLDTLERVYMRSKRPTNAMISNIVQVTNLPRKTVIKWFEDKRAEDGVPKQRLPYQLSTNETD 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01321 313 Pfam Homeodomain 244 294 IPR001356 GO:0003677
Vivi3g01321 313 SUPERFAMILY Homeodomain-like 241 308 IPR009057 -
Vivi3g01321 313 SMART HOX_1 241 303 IPR001356 GO:0003677
Vivi3g01321 313 PANTHER ZINC-FINGERS AND HOMEOBOXES RELATED 46 306 - -
Vivi3g01321 313 MobiDBLite consensus disorder prediction 117 137 - -
Vivi3g01321 313 Gene3D - 240 303 - -
Vivi3g01321 313 ProSiteProfiles 'Homeobox' domain profile. 239 299 IPR001356 GO:0003677
Vivi3g01321 313 CDD homeodomain 242 294 IPR001356 GO:0003677
Vivi3g01321 313 MobiDBLite consensus disorder prediction 48 68 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01321 Vivi-Chr3 21608985 21612498 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Vivi3g01321 Homeodomain 3.6e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01321 - - gmx:100784216 345.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01321 3 21608985 21612498 Vivi3g01321 3 21608985 21612498 ECH