Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01309 ATGTCAGTCGCATCCTGGTCATCATCGTCATCTCGAGTTTTTGACACCATAAATGAATGTCTCACCCTTGCAAAATCAGATTCTCATGAAGCTCAAGAGAAAGGTCTTCAAACCCTGGCTGCAATCACCAAGGTAAGTCCTCAAAACAGAACCTTGGTAGCTCAAACAGATGGAGCAATCCCAACCTTAGCCACTCTCACGAATGCTTCCTCCTCTATTATCCAAACCCTTTCCTTGTTGATTCTCTTTAACCTTTCTCTCAACCCTGATTTAAAGCAATCTCTAGCAGATATGGAAACAATCTATCACCTCAATTCTCTCGTAAACTCATCGTCATCATCGTCGCGTTCCCTTGATTCATGCAAACTTGCCTCTTCATTGATTTGTAGTTTGGCCATGTTTGATAAAAACAAAGCCAAATTCGGAGTAGCAGGAACTGTTCAGCTGTTAGTGAACGCTATTGAAGACTCTCTTATCGATTCCACTGACGCTCATCATTTTTTAACTTCTTTAGCCGAACTCGTCCAATTCCACGGAAATTGCACTTTAGCTGTTCGAGGCGGAGCAGTTCCGGTGCTGCTTCAAGTCGTAAAAAGCACTGATAATATCAACGAGGATTTGGCTGGAACGTCTCTTACCGTTCTCGGTCTCCTTGTGAGGTTTGATGAAGGGTTGAATGTAGTGAAGAAAACTAATGAGATAATAAGTTCAATGTTAAGTGTGTTGAAAGGAAGGTCCTTGTTGTGTAAAGAAGGTGCAGTTGATATTCTTGTTAGACTTTTTGATGAGAGTGATGAATGTGTTAGAGAGGCTTTGATGTTAGCAGAATTTTCAAGTGTGTTGGCTGATCTTTCTGTGAGGGGTTCTGCAAGAGTTAGAGATAAGGCTGATTTGTTGATGAGGAAGATTGCTAAGATGAGTTTAGAGACTAACATGGAATTGGTTTGCTCACTATATGATTAA 963 0.4102 MSVASWSSSSSRVFDTINECLTLAKSDSHEAQEKGLQTLAAITKVSPQNRTLVAQTDGAIPTLATLTNASSSIIQTLSLLILFNLSLNPDLKQSLADMETIYHLNSLVNSSSSSSRSLDSCKLASSLICSLAMFDKNKAKFGVAGTVQLLVNAIEDSLIDSTDAHHFLTSLAELVQFHGNCTLAVRGGAVPVLLQVVKSTDNINEDLAGTSLTVLGLLVRFDEGLNVVKKTNEIISSMLSVLKGRSLLCKEGAVDILVRLFDESDECVREALMLAEFSSVLADLSVRGSARVRDKADLLMRKIAKMSLETNMELVCSLYD 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01309 320 Gene3D - 14 117 IPR011989 -
Vivi3g01309 320 Gene3D - 118 294 IPR011989 -
Vivi3g01309 320 SUPERFAMILY ARM repeat 16 307 IPR016024 -
Vivi3g01309 320 PANTHER U BOX DOMAIN-CONTAINING 17 301 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01309 42 307 U-box Gene Family AT3G46510 25.843 2.21e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01309 - - gmx:121174819 417.927
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01309 3 21422262 21423224 Vivi3g01309 3 21422262 21423224 ECH