Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01291 ATGGGGGCACCGTTCGAGGGAATTGTTCAAGATGTTAAAGGAAGAGCTAAATGCTATAAGCAAGATTGGGTTTGTGCAATCTGTTCTGGTGTTAGCATATTGGCTCCGACTTTCTACATATTCTTTGCTTCTGCACTTCCTGTTATTGCATTTGGAGAGCAACTTAGTAGGGATACAAATGGAAGCTTGAGCACGGTCGAAACATTAGCATCTACTGCTATTTGTGGAATTATCCACTCGATTATAGGTGGCCAACCTTTGTTGATTTTAGGAGTTGCGGAACCGACTGTTATAATGTATACTTATCTCTACAATTTCTGCAAAAATACACCTGATTTGGGTGCTGAGCTCTTTTTAGCTTGGGCTGGTTGGGTTTGTGTTTGGACGGCGTTAATGTTAATTTTGCTTGCAATTTTTAATGCTTGCAATATTATCACTAGATTTACAAGAATTGCTGGGGAGTTATTTGGCATGCTTATCACTGTTCTTTTCTTTCAAGAGGCTATAAAGGGACTGATAGGCGAGTTCAGCAATCCCAAAGTTGAAGATCCTTCGTCGGAGCAAATTCAATGGCAGTATACAAATGGATTACTTGCAGTCATTTTCTCTCTAGGACTAATTGTCTCTGCACTTAAAAGCAGAAGAGCAAGAACATGGAGATATGGAACAAGGAAGCTACGAGGCTTTATTGCAGATTATGGGGTTCCATTGATGGTAGTGTTGTGGACTGCAGTATCTTATATAAAGCCTAGCACCGTTCCACATGATGTTCCTAGAAGGTTGTTTTGTCCCCTTCCCTGGGAACCCGCATCTCTTTATCACTGGACAGTGGTGAAGGATATGTGGAAGGTACCTGTGGCTTATATATTTGGGGCAATTGTTCCAGCTTCGATGATAGCGGGTTTATACTTTTTCGATCATAGTGTGGCTTCTAAGATGGCACAACAGAAAGAATTCAACCTTCAAAAACCATCTGCCTACCATTATGATGTTTTCCTACTTGGAATAATGACTTTGATTTGCGGTCTCCTTGGCCTTCCTCCTTCAAACGGAGTCCTTCCACAGTCCCCCATGCATACAAAGAGTTTGGCAGTTCTTAAGAGGCAGCTGATCCGAAAGAAGGTTGTGAAAAGCGCCAAGGAATGCATGGAACAACACAGTACCAGCTCTGAGTTATATGGAAAAATGCAAGCCGTGTTCGTTGAAATGGATACAGCCCCTAGCGTTAAAGAATTGGAGACTTTGAAAGAAGCTGTAATGAAATCTGATACCAAGGCTGGTGCAATGGAACCTTTTGATCCTGAGAAATACATAGACGCTAATTTACCGGTCCGGGTTAATGAACAAAGAATGACCAACTTATTGCAGTCCCTCCTGGTTGGCCTGTCGATAATAGGCATCTCCGTTATCAAGAAGATACCAACTTCAGTTTTATGGGGTTATTTTGCTTACATGGCCATTGATAGTCTTCCAGGGAATCAGTTCTGGGAAAGGCTATTGCTCCTCTTCATCGCCCCGAGCCGACGTTTCAAAATTTTGCAAGAATCGCATGCCTCATTCGTAGAGACAGTACCATTCAAAACCATAGCTGGATTTACAGCCTTACAGTTCGCGTATTTTCTGTTCTGTTTTGGGGTCACATGGATACCGGTTGGTGGAATTTTGTTTCCACTACCGTTCTTCCTTCTCATAGTTCTACGAGAACACGTTCTACCAAACGTATTCAATCCTAACGATCTTCAGGAACTAGATGCTTCTGAATACGAGGAAGTTATCGGTGCTCCGCGTGGAATACGTAGCATGTCACTAAAGGATACGGAACCATGTGGTAGTGATACTGATGGAAGCACGGAAGATTACTATGATGCAGAGATTTTGGACGAGATGACAACCAGCAGGGGAGAGTTGAAACTTAGAACTGTAAGCTTCAATGATCGAAACCGCAGTAACAGCTTCAACGATCGAAACCAAAGCAACAGCTTCAATGATCGAAACCAAAGCAACAGCTTCAATGAAGGCAGACACATTTAG 2031 0.4249 MGAPFEGIVQDVKGRAKCYKQDWVCAICSGVSILAPTFYIFFASALPVIAFGEQLSRDTNGSLSTVETLASTAICGIIHSIIGGQPLLILGVAEPTVIMYTYLYNFCKNTPDLGAELFLAWAGWVCVWTALMLILLAIFNACNIITRFTRIAGELFGMLITVLFFQEAIKGLIGEFSNPKVEDPSSEQIQWQYTNGLLAVIFSLGLIVSALKSRRARTWRYGTRKLRGFIADYGVPLMVVLWTAVSYIKPSTVPHDVPRRLFCPLPWEPASLYHWTVVKDMWKVPVAYIFGAIVPASMIAGLYFFDHSVASKMAQQKEFNLQKPSAYHYDVFLLGIMTLICGLLGLPPSNGVLPQSPMHTKSLAVLKRQLIRKKVVKSAKECMEQHSTSSELYGKMQAVFVEMDTAPSVKELETLKEAVMKSDTKAGAMEPFDPEKYIDANLPVRVNEQRMTNLLQSLLVGLSIIGISVIKKIPTSVLWGYFAYMAIDSLPGNQFWERLLLLFIAPSRRFKILQESHASFVETVPFKTIAGFTALQFAYFLFCFGVTWIPVGGILFPLPFFLLIVLREHVLPNVFNPNDLQELDASEYEEVIGAPRGIRSMSLKDTEPCGSDTDGSTEDYYDAEILDEMTTSRGELKLRTVSFNDRNRSNSFNDRNQSNSFNDRNQSNSFNEGRHI 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01291 676 Gene3D Helical hairpin bin 15 57 - -
Vivi3g01291 676 MobiDBLite consensus disorder prediction 647 676 - -
Vivi3g01291 676 FunFam probable boron transporter 2 15 57 - -
Vivi3g01291 676 Pfam HCO3- transporter family 187 385 IPR011531 GO:0006820|GO:0016020
Vivi3g01291 676 Pfam HCO3- transporter family 444 534 IPR011531 GO:0006820|GO:0016020
Vivi3g01291 676 Pfam HCO3- transporter family 4 182 IPR011531 GO:0006820|GO:0016020
Vivi3g01291 676 MobiDBLite consensus disorder prediction 647 669 - -
Vivi3g01291 676 PANTHER ANION EXCHANGE PROTEIN 2 591 IPR003020 GO:0005452|GO:0006820|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01291 Vivi-Chr3 21299899 21303849 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01291 3 645 Antiporters AT5G25430 66.923 0.0 919
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01291 K24194 - gmx:100787412 1058.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01291 3 21299899 21303849 Vivi3g01291 3 21299899 21303849 ECH
Vivi3g01291 3 21299899 21303849 Vivi4g05067 4 181600730 181605296 ECH
Vivi4g05067 4 181600730 181605296 Vivi3g01291 3 21299899 21303849 PCT