Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01204 ATGGGAGGTATCAGTCTTGAAGAAATCAAGAACGAGAACGTTGATCTGGAACGGATTCCGGTGGAGGAAGTGTTTGAGCAGCTGAAATGTTCGAAAGAAGGTTTATCGTCCGACGAAGGAGCGAATCGGCTTCAAGTTTTTGGTCCGAACAAATTGGAAGAGAAAAAGGAGAGCAAGTTTTTGAAGTTTTTAGGGTTTATGTGGAATCCTTTGTCATGGGTTATGGAAGCTGCTGCTATTATGGCGATTGCTTTGGCTAATGGAAGTGGAAGACCTCCGGATTGGCAAGATTTTGTTGGGATTATTTCTCTGTTGGTTATTAATTCAACTATCAGTTTTATTGAAGAGAATAATGCTGGTAATGCTGCTGCTGCTCTCATGGCTGGTTTGGCCCCCAAAACAAGGGTTCTCAGAGATGGTCGCTGGTCTGAAGAAGATGCTGCAATTTTAGTCCCTGGTGACATAATCAGCATTAAATTAGGAGATATCATTCCTGCGGATGCTCGTCTTCTTGAGGGTGATGCTTTGAGTGTTGATCAGTCGGCTTTAACTGGAGAATCTCTTCCGGCTACGAAGAATCCCTCGGATGAAGTCTTTTCTGGATCAACTGTTAAGAAAGGTGAGATTGAAGCAGTTGTTATTGCTACCGGAGTGCATACATTTTTCGGTAAAGCTGCTCACCTTGTTGACAACACCAATCAAGTTGGTCACTTTCAGAAAGTCCTCACAGCAATTGGTAATTTCTGCATTTGCTCAATTGCTGTTGGAATACTGATTGAGCTCGTTGTCATGTATCCGATTCAACACCGCAAGTATAGAGATGGAATTGACAATCTTTTGGTTCTATTGATCGGTGGAATTCCAATTGCCATGCCTACTGTTTTGTCTGTTACTATGGCTATTGGTTCTCACAGGCTTTCTCAACAAGGTGCAATTACAAAGAGAATGACAGCTATTGAGGAAATGGCAGGAATGGATGTTCTCTGCAGTGACAAAACTGGGACTCTGACCTTAAATAAGCTGTCTGTTGATAAAAACTTGATTGAGGTTTTTGCTAAGAATGTAGAGAAGGATTATGTTATCCTTCTTGCAGCAAGGGCTTCTAGGACTGAGAATCAGGATGCAATAGATGCTGCAATTGTTGGTATGCTTGCTGATCCAAAGGAGGCACGAGCTGGTGTCAGGGAGATTCATTTTTTCCCATTCAACCCAGTAGACAAGAGAACTGCTTTAACCTACATTGACTCTGATGGAAATTGGCATCGGTCAAGCAAAGGTGCTCCTGAGCAGATTTTGAACCTCTGCAACTGCAAAGAGGATGTCAGGAAGAAAGCTCATTCCGTAATTGACAAGTTCGCGGAGCGTGGACTCCGTTCTTTGGGTGTTGCTAGACAGGAAGTACCTGAGAAAAATAAAGATAGCCCTGGTGCACCATGGCAATTTGTTGGTCTTTTACCATTATTTGATCCTCCTAGGCATGATAGTGCTGAAACCATCACAAGAGCTCTGAACCTTGGTGTGAACGTTAAGATGATTACTGGTGATCAGCTTGCCATTGCCAAGGAAACTGGCCGGAGGCTTGGGATGGGAACAAACATGTATCCATCTTCGTCATTACTCGGTCAAAGCAAGGATGCTGCTGTTGCAGCTCTTCCAGTTGATGAGTTGATTGAGAAGGCTGATGGATTTGCTGGAGTATTTCCTGGTAGGTCCTTCATTGTGATGATGATGATAACATCATCAATCACATTGTTTTCAATTATTTCAAACATCGTAGAACTCCTTCTTCTGTTAACTATACAATTACATTTTGAAAACATGCTAATTGTTTTTATCCCCTCCTGTGACATGGCAGAACACAAATATGAAATCGTAAAAAGGCTGCAAGAGAGGAAACATATATGTGGAATGACAGGTGATGGTGTCAACGATGCTCCTGCGTTAAAGAGAGCAGATATCGGAATCGCTGTTGCTGACGCTACAGATGCTGCTAGAGGTGCTTCTGATATTGTCCTTACTGAACCTGGTCTGAGTGTAATTATAAGTGCAGTGCTCACGAGCAGGGCAATTTTTCAAAGGATGAAGAACTATACTATCTATGCTGTGTCAATCACCATTCGTATTGTGTTTGGTTTCATGTTCATTGCGTTGATCTGGAAGTTTGATTTTGCACCCTTCATGGTGTTGATTATCGCCATACTAAATGATGGTACCATTATGACAATATCCAAGGATAGAGTGAAACCATCTCCACTTCCAGACAGTTGGAAATTGAAAGAGATATTTGCTACTGGTGTTGTGCTAGGTAGCTACATGGCACTAATGACAGTAGTATTTTTCTGGCTCATGAAGGATACCGACTTCTTCTCGGACAAGTTCGGTGTGAGGTCTATCAGAAACAACCCTGAAGAAATGATGGCGGCCCTCTACCTACAAGTCAGTATTATAAGCCAGGCTCTAATTTTTGTCACCAGGTCCCGTAGCTGGTCCTTTTTGGAAAGACCTGGTCTTCTCCTATTGGGTGCTTTTATGATTGCTCAGCTGGTGGCAACTTTTATAGCAGTATATGCCAATTGGGGCTTTGCGAGAATTCAGGGAATGGGATGGGGTTGGGCTGGTGTAATCTGGGTGTACAGTCTAGTGACATATTTCCCTCTTGATATACTCAAATTCATAATCCGCTATGTTCTAAGTGGCAAAGCTTGGGATAATCTTTTGGAGAACAAGACTGCTTTCACAACAAAGAAAGACTACGGCAAAGAAGAGAGAGAAGCACAGTGGGCAACTGCTCAGAGGACTCTCCATGGTCTTCAGTCACCTGAAACAACCAACCTTTTCAATGACAAGAATAGCTACAGGGAGCTTTCTGAGATTGCTGAGCAAGCCAAGAGACGCGCTGAGGTTGCACGGCTTAGGGAGCTTCATACTCTTAAGGGTCACGTTGAATCAGTCGTGAAGCTTAAGGGACTTGACATTGACACTATGCAACAACATTATACTGTTTAA 3006 0.4285 MGGISLEEIKNENVDLERIPVEEVFEQLKCSKEGLSSDEGANRLQVFGPNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIALANGSGRPPDWQDFVGIISLLVINSTISFIEENNAGNAAAALMAGLAPKTRVLRDGRWSEEDAAILVPGDIISIKLGDIIPADARLLEGDALSVDQSALTGESLPATKNPSDEVFSGSTVKKGEIEAVVIATGVHTFFGKAAHLVDNTNQVGHFQKVLTAIGNFCICSIAVGILIELVVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDKNLIEVFAKNVEKDYVILLAARASRTENQDAIDAAIVGMLADPKEARAGVREIHFFPFNPVDKRTALTYIDSDGNWHRSSKGAPEQILNLCNCKEDVRKKAHSVIDKFAERGLRSLGVARQEVPEKNKDSPGAPWQFVGLLPLFDPPRHDSAETITRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSSSLLGQSKDAAVAALPVDELIEKADGFAGVFPGRSFIVMMMITSSITLFSIISNIVELLLLLTIQLHFENMLIVFIPSCDMAEHKYEIVKRLQERKHICGMTGDGVNDAPALKRADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFMFIALIWKFDFAPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVVLGSYMALMTVVFFWLMKDTDFFSDKFGVRSIRNNPEEMMAALYLQVSIISQALIFVTRSRSWSFLERPGLLLLGAFMIAQLVATFIAVYANWGFARIQGMGWGWAGVIWVYSLVTYFPLDILKFIIRYVLSGKAWDNLLENKTAFTTKKDYGKEEREAQWATAQRTLHGLQSPETTNLFNDKNSYRELSEIAEQAKRRAEVARLRELHTLKGHVESVVKLKGLDIDTMQQHYTV 1001
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01204 1001 FunFam Plasma membrane ATPase 132 216 - -
Vivi3g01204 1001 Gene3D - 950 1001 - -
Vivi3g01204 1001 NCBIfam plasma-membrane proton-efflux P-type ATPase 34 577 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vivi3g01204 1001 Gene3D - 485 586 IPR023214 -
Vivi3g01204 1001 SFLD p-type atpase 311 689 IPR044492 -
Vivi3g01204 1001 NCBIfam HAD-IC family P-type ATPase 619 728 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi3g01204 1001 NCBIfam HAD-IC family P-type ATPase 101 348 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi3g01204 1001 PRINTS P-type cation-transporting ATPase superfamily signature 329 343 - -
Vivi3g01204 1001 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Vivi3g01204 1001 PRINTS P-type cation-transporting ATPase superfamily signature 638 657 - -
Vivi3g01204 1001 PRINTS P-type cation-transporting ATPase superfamily signature 661 673 - -
Vivi3g01204 1001 FunFam Plasma membrane ATPase 341 488 - -
Vivi3g01204 1001 PANTHER CALCIUM-TRANSPORTING ATPASE 17 933 - -
Vivi3g01204 1001 ProSitePatterns E1-E2 ATPases phosphorylation site. 331 337 IPR018303 -
Vivi3g01204 1001 SFLD Haloacid Dehalogenase 311 689 - -
Vivi3g01204 1001 Gene3D - 66 142 - -
Vivi3g01204 1001 Gene3D - 181 333 - -
Vivi3g01204 1001 Gene3D - 640 896 - -
Vivi3g01204 1001 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 897 IPR023298 -
Vivi3g01204 1001 SUPERFAMILY Calcium ATPase, transduction domain A 132 229 IPR008250 -
Vivi3g01204 1001 FunFam ATPase 4 plasma membrane-type 622 865 - -
Vivi3g01204 1001 Coils Coil 952 972 - -
Vivi3g01204 1001 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Vivi3g01204 1001 SUPERFAMILY HAD-like 325 685 IPR036412 -
Vivi3g01204 1001 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Vivi3g01204 1001 Pfam E1-E2 ATPase 131 308 - -
Vivi3g01204 1001 Gene3D - 341 484 IPR023299 GO:0000166
Vivi3g01204 1001 CDD P-type_ATPase_H 34 891 IPR006534 GO:0008553|GO:0016020|GO:0120029
Vivi3g01204 1001 FunFam Plasma membrane ATPase 481 584 - -
Vivi3g01204 1001 PRINTS H+-transporting ATPase (proton pump) signature 560 576 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi3g01204 1001 PRINTS H+-transporting ATPase (proton pump) signature 445 463 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi3g01204 1001 PRINTS H+-transporting ATPase (proton pump) signature 810 831 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Vivi3g01204 1001 FunFam Plasma membrane ATPase 613 686 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01204 Vivi-Chr3 20199432 20205921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01204 5 1001 Primary Pumps ATPases AT4G30190 82.247 0.0 1637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01204 K01535 - gmx:100785442 1736.47