Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01191 ATGAAACTCAAGAAGAGAAAAAAACTATATTCAAAAGGGAAGCTCTATACAACAATTATGATTTCCTTGATTAATAAGGAGGAAGTAATTGAACCTGCGATCCAAGGAACATGCAATGTACTTCAAGCTTGTAAAATTGCTAATGTCAAACGAATAGTGTATGTTTCATCGGGGGCTGCCATAATAAAAAATCCCTATTTTCCAAAAACTGGACCCATTAATGAGTTAAGTTGGTCTAATGGAGATTTCTGCCTAAAATATAAGAGGTGGTATTGCTACGCCAAGACAATGGCAGAAAAGAATGCAGTGGAAATTGCAAAAAGAGATGCGCTTGATTTAATTAGCATTTGCCCTACTCATGTTATGGGACCATTGTCAGAGTCACCCACTAATGCTAATGTTGCATATAGAATTTTTGGTACTAGGCCTAGAGTTTGTTTTCATTATAGTGAGTGA 456 0.3596 MKLKKRKKLYSKGKLYTTIMISLINKEEVIEPAIQGTCNVLQACKIANVKRIVYVSSGAAIIKNPYFPKTGPINELSWSNGDFCLKYKRWYCYAKTMAEKNAVEIAKRDALDLISICPTHVMGPLSESPTNANVAYRIFGTRPRVCFHYSE 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01191 151 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 26 131 - -
Vivi3g01191 151 Pfam NAD dependent epimerase/dehydratase family 17 132 IPR001509 -
Vivi3g01191 151 Gene3D - 16 145 - -
Vivi3g01191 151 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 25 129 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01191 Vivi-Chr3 20015135 20063564 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01191 28 130 Monolignol Biosynthesis Gene Families AT2G33590 52.427 9.69e-32 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01191 - - vvo:131660556 263.462