Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01190 ATGACTACTTTTCCAAATCAGCTTCGACTTTTTAAGTCAAATATTTTGGATTATAGCTCTATTCTCCCGGCAGTTAAGGGATGCAGAGGTGTTTTCCACCTTGCTTGTCCTATTCCGTTTGGTCACGTTAAAAATCCTTTGGAGGAAGTAATTGAACCTGCGATCCAAGGAACATGCAATGTACTTCAAGCTTGTAAAATTGCTAATGTCAAACGAATAGTGTATGTTTCATCGGGGGCTGCCATAATAAAAAATCCCTATTTTTCAAAAACTGGACCGATTAATGAAGGTGGTATTGCTACGCCAAGACAATGGCAGAAAAGAATGCAGTGGAAATTGCCAAAAGAGATGTGCTTGATTTAA 363 0.3857 MTTFPNQLRLFKSNILDYSSILPAVKGCRGVFHLACPIPFGHVKNPLEEVIEPAIQGTCNVLQACKIANVKRIVYVSSGAAIIKNPYFSKTGPINEGGIATPRQWQKRMQWKLPKEMCLI 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01190 120 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 98 IPR036291 -
Vivi3g01190 120 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 10 88 IPR002225 GO:0003854|GO:0006694|GO:0016616
Vivi3g01190 120 Gene3D - 2 115 - -
Vivi3g01190 120 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01190 Vivi-Chr3 19983736 19990108 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01190 6 111 Monolignol Biosynthesis Gene Families AT2G33590 49.057 3.23e-30 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01190 - - vvo:131660555 251.906