Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01153 ATGAAACTCAAGAAGAGAAAAAAACTATATTCAAAAGGGAAGCTCCATACAACAATTATGATTTCCTTGATTAATAAGAGGTGGTATTGCTATGCCAAGACAATGGCAGAAAAGAATGCCGTGGAAATTGCAAAAAGAGATGCCCTTGATCTAATTAGCATTTGCCTTACTCATGTTATGGGACCATTGTCAAAGTCACCCACTAATGCTAATGTTGCATATAGAATTTTTGGTGGTCAAATGAAGGGTAAGTATTGGCCAATTGTGGACGTGAGGGACGTAGCAAATGCATTACTTTTGGCTTACGAGAATCCTATAGCCAAAGGGAGATACATATCCACGTCCCACACTATAACCGAAAAAGATCCGAGAGAGAAGATGAGGATTTTAAATCCCAACTTAAACTTACCCCCACAATGTGCATCGAAGATGATGATATCTATGAGAAGGTGA 453 0.3863 MKLKKRKKLYSKGKLHTTIMISLINKRWYCYAKTMAEKNAVEIAKRDALDLISICLTHVMGPLSKSPTNANVAYRIFGGQMKGKYWPIVDVRDVANALLLAYENPIAKGRYISTSHTITEKDPREKMRILNPNLNLPPQCASKMMISMRR 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01153 150 Gene3D - 13 149 - -
Vivi3g01153 150 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 25 136 - -
Vivi3g01153 150 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 27 120 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01153 Vivi-Chr3 19230600 19232858 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01153 25 137 Monolignol Biosynthesis Gene Families AT2G33590 43.089 1.34e-23 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01153 - - vvo:131660536 296.204