Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01152 ATGGCATCATCATCGAACTCCCCATCTGGTAGTAGCACTACCAATATTCTCCGTGTCATTAGCGCAGATGGATTTATTGGTTCCTGGCTACTCAATTTATTGCTATCGAAGGAATATTACGTACATGCGACCACTAAAGTACCACAACCAGACTGTCTTACTAAATGTCTACTATTAGGCAAAATAATGACTTCTTTTCCAAATCAGCTTCGACTCTTTAAGTCAAATATTTTGGATTATAGCTCTATTCTCCCGGCAGTTGTGGGATGCAGAGGTGTTTTCCACCTTGCTTGTCCTATTCCGTTTGCTCACGTTAAAAATCCTTTGGAGGAAGTAATTGAACCTGCGATCCAAGGAACATGCAATGTACTTCAGGCTTGTAAAATTGCTAATGTCAAACGAATAGTGTATGTTTCATCGGGGGCTGCCATAATAAAAAATCTCTATTTTTCAAAAACTGGACCCATTAATGAGTTAAGTTGGTCTGATGGAGATTTCTGCCTAAAATATAAGAGGTGGTATTGCTACGCCAAGACAATGACAGAAAAGAATGCAGTGAAAATTGCAAAAAGAGATGCGCTTGATTTAATTAGCACTTGCCCTACTCATGTTATGAGACCATTGTCAGAGTCACCCACTAATGCTAATGTTGCATATAGAATTTTTGGTACTAGGCCTAGAGTTTGTTTTCTTTATAGTGAGTGA 705 0.3872 MASSSNSPSGSSTTNILRVISADGFIGSWLLNLLLSKEYYVHATTKVPQPDCLTKCLLLGKIMTSFPNQLRLFKSNILDYSSILPAVVGCRGVFHLACPIPFAHVKNPLEEVIEPAIQGTCNVLQACKIANVKRIVYVSSGAAIIKNLYFSKTGPINELSWSDGDFCLKYKRWYCYAKTMTEKNAVKIAKRDALDLISTCPTHVMRPLSESPTNANVAYRIFGTRPRVCFLYSE 234
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01152 234 Gene3D - 9 227 - -
Vivi3g01152 234 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 22 209 IPR036291 -
Vivi3g01152 234 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 19 214 - -
Vivi3g01152 234 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 19 207 IPR002225 GO:0003854|GO:0006694|GO:0016616
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01152 Vivi-Chr3 19201903 19203724 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01152 19 213 Monolignol Biosynthesis Gene Families AT2G33590 47.692 1.20e-59 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01152 - - vvo:131660535 474.167