Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01149 ATGACTACTTTTCCAAATCAGCTTCGACTCTTTAAGTCAAATATTTTGGATTATAGCTCTATTCTCCCGGCAGTTGTGGGATGCAGAGGTGTTTTCCACCTTGCTTGTCCTATTCCGTTTGGTCACGTTAAAAATCCTTTGGAGGAAGTAATTGAACCGGCGACCCAAGGAACATGCAATGTACTTCAAGCTTGTAAAATTGCTAATGTCAAACGAATAGTGCATGTTTCATCGGGAGCTGCCATAAATGCAAAAATTCCACAAATTGGTCTCAGTCGAAACAGTAGACACTCCGAAACCACACCTGCAGAGAAAAACACTCCCGCAGCAGACAGCACTAGACTAACAGAAATAAACCGACACGGACCAAATCACCAATGCGCGAATCTGAGACTGATTGAGGACAACAACTTCTTGGACCATAAAATCTGA 432 0.4259 MTTFPNQLRLFKSNILDYSSILPAVVGCRGVFHLACPIPFGHVKNPLEEVIEPATQGTCNVLQACKIANVKRIVHVSSGAAINAKIPQIGLSRNSRHSETTPAEKNTPAADSTRLTEINRHGPNHQCANLRLIEDNNFLDHKI 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01149 143 Gene3D - 2 117 - -
Vivi3g01149 143 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 10 84 IPR002225 GO:0003854|GO:0006694|GO:0016616
Vivi3g01149 143 MobiDBLite consensus disorder prediction 92 113 - -
Vivi3g01149 143 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 6 86 IPR036291 -
Vivi3g01149 143 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01149 Vivi-Chr3 19153137 19155194 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01149 6 81 Monolignol Biosynthesis Gene Families AT2G33590 57.895 4.30e-25 95.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01149 - - vvo:131660531 294.664