Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01081 ATGCAGTTATGTGATTTTGGACTTGCTATGTGGGGACCAACAACTTCATTGTTTACGATACAAAACGACGTAGTAGGAACCTTTGGTTATCTTGCACCTGAACATTTCATGTATGGAAAGGTGAGTGACAAGATAGATGTATATGCCTTTGGTGTTGTCCTACTTGAACTCATATCAGGAAGGGAACCGATCCACTCGAAAGCTTGCAAAGCATGCCAGAGTTTGGTCGCGTGGGCAAAACCGATTTTAGAGAGTGGAGATGTTAAAAGGTTAATGGATACAAATTTGCAAGGAAAGTTTGATGTAGAACAAATGAACAGAATGGTTCTTGCAGCGTCGCTATGCTTAACACGGGCTGCGCGGCTTCGTCCTACAATGAATCAGATACTAAATATATTGAAAGGATGCGACGAGAAAGACGAAAACATGTTTAAATCTCAAGAGAGTAATCGCGATCATTCAGAAAATCAAGAAAACGTTGATGACGAAGTTTATCCGAAATCAAATGCAGGATTGCACCTAAACCTTGCATTACTTGATATTTGA 546 0.4011 MQLCDFGLAMWGPTTSLFTIQNDVVGTFGYLAPEHFMYGKVSDKIDVYAFGVVLLELISGREPIHSKACKACQSLVAWAKPILESGDVKRLMDTNLQGKFDVEQMNRMVLAASLCLTRAARLRPTMNQILNILKGCDEKDENMFKSQESNRDHSENQENVDDEVYPKSNAGLHLNLALLDI 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01081 181 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01081 181 Gene3D Transferase(Phosphotransferase) domain 1 1 163 - -
Vivi3g01081 181 MobiDBLite consensus disorder prediction 144 164 - -
Vivi3g01081 181 Pfam Protein kinase domain 2 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g01081 181 PANTHER OS08G0249100 PROTEIN 2 160 IPR046958 -
Vivi3g01081 181 MobiDBLite consensus disorder prediction 144 162 - -
Vivi3g01081 181 SUPERFAMILY Protein kinase-like (PK-like) 3 141 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01081 Vivi-Chr3 18120863 18121487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01081 2 133 Glycoside Hydrolase AT3G07070 42.105 9.43e-30 111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Vivi3g01081 Pkinase 8.4e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01081 - - vvo:131657656 368.622