Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01060 ATGGAAGGAGAAATTAGGGTTTGGTGTTTGGAACATCTTCTTAGAAAATCAAGCATCAAGACCAACCTCATCAACAAATTTATTTCTAAAATCTCACTCTCCAATACCGATTACCGCACCAAGAAAACAATGATCCTCAGAACCCTCGAAGATGCCTTGTCGGAAGCATTTATCCCAGAATATATGCTCCAAATTTTTGAGGTACTAGAAAAACTGTTACTTTGTCGCGACTCTTCAAATCCAAATTCAAATTCAAATTCAATCGCTGCTGCCATGAAAGCTGCTTATTGTAGTATTGCAGTTGAATTTACACTCAAGCATCTCGATGCAGGAACATCAAACCCTATGTACGGCAAAGCGGTGAAGAGGATATGGAAAGATAGGGTTCATGATATGCACAATGAGGGAAGTAGTTTTCTATTATCCGATGAATTGAAAGAATGGAAAAGTGAGATTGAGAAATCGCTTTTGGATGGAGAAGTTAGGAAGAAGCTTGCTTCCATTCCGTTTACTCGAAGAGACGCGATTGTAAAGGTGCAGGCTTTTTTGGCTGAAGCTTGGGAGGACTTAGGCCCTTCCTTTCTTGAATCAGTGGCGAACAATCAGTTGGATTCGAGTGTGGATGGCTTGCAGAAACAACAGGAAGTTTCTCCAATAGAAATTCGGAAAGACAATGAGAAGGTTGAAGGGAAGTTTACTACTGCTGTTGATCTTGAGGAAGTGGATTTATCAACCTCTTGTGTAAAAGCTGACACTTTGCGGATTAGCGAGAGCACGAAGAATGGGGAATCTCTTAAGGGAAGTTCTGTGGAGTTGCAAACCTTGGCCAAGGATTCTGGTTTGGTAATTGAGGACACGAATGAGGAGCCACAAATGGAAAACCCGAGTTTGGATGCAAACTTGCCCAACGCACAAGCTTGCCAGGGTAGTAATAATAACGAGACTAATCTTAATGAGACAACTTCTGTTCATCAAAGTGATGCTCATCTCCCTAACTTGATGAAACCAAATAGTACTGCTCGAACTCATGAGTGGGATGATTCCATAGATGGCTTACATGCTAGTAAATTTAGTTTGCCTAGTCCAAAGAGGAGGAAACATTCTCCATTGAAGGCGTATGAACCAAAAAACATCGTAAAAAGGAGAAAACCGAAAAAATGGAGTAAATTGGAAGAGGATACCCTAAGAACCGGAGTAAACACGTATGATTTTTTTTAA 1218 0.4064 MEGEIRVWCLEHLLRKSSIKTNLINKFISKISLSNTDYRTKKTMILRTLEDALSEAFIPEYMLQIFEVLEKLLLCRDSSNPNSNSNSIAAAMKAAYCSIAVEFTLKHLDAGTSNPMYGKAVKRIWKDRVHDMHNEGSSFLLSDELKEWKSEIEKSLLDGEVRKKLASIPFTRRDAIVKVQAFLAEAWEDLGPSFLESVANNQLDSSVDGLQKQQEVSPIEIRKDNEKVEGKFTTAVDLEEVDLSTSCVKADTLRISESTKNGESLKGSSVELQTLAKDSGLVIEDTNEEPQMENPSLDANLPNAQACQGSNNNETNLNETTSVHQSDAHLPNLMKPNSTARTHEWDDSIDGLHASKFSLPSPKRRKHSPLKAYEPKNIVKRRKPKKWSKLEEDTLRTGVNTYDFF 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01060 405 PANTHER MYB TRANSCRIPTION FACTOR 4 402 - -
Vivi3g01060 405 MobiDBLite consensus disorder prediction 308 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01060 Vivi-Chr3 17769779 17771904 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01060 8 402 Single Myb Histone (SMH) Gene Family AT1G15720 26.119 6.58e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01060 - K11111 psat:127081272 588.186