Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01017 ATGGATGGAGAAATTAGGGTTTGGTGTTTGGAACATCTTCTTAGAAAATCAAGCATCAAAACCAACCTCATCAACAAACTTATTTCTAAAATCTCACTCTCCAATACCGATTACCGCACCAAGAAAACAATCATCCTCAGAACCCTCGAAGATGCCTTGTCGGAAGCATTTATCCCAGAATATATGCTCCAGATTTTTGAGGTACTAGAAAAACTGTTACTTTGTCACGACTCTTCAAATCCAAATTCAAATTCAATAGCTGCTGCCATGAAAGCCGCTTATTGTAGTATTGCAGTTGAATCTACACTCAAGCATCTTGACGCAGGAATATCAAACCCTATTTACGGCAAAGCGGTAAAGAGGATATGGGAAGTTAGGGTTCATGATATGCATAACGAGGGAAGTAGTTTTCTATTATCAGATGAATTGAAAGAATGGAAAAGTGAGATTGAGAAATCGCTTTTGGATGGGGAAGTTAGGAAGAAGCTTGCTTCCATTCCGTTTACTCGAAGAGACGCGATTGTAAAGGTGCAAGCTTTTTTGGCTGAAGCTTGGGAGGATTTAGGCCCTTCTTTTCTTGAATCAGCTGCGAAGAATCAGTTGGATTCGAGTGTGGGTGGCTTGCAGATGAAGAAACAACATGAGAAAGTTTCTCCGATAGAAATTCTGAAAGACAATGAGAAGGCTGAAGGGAAGTTTACTACTGTTGTTGATGTTGAGAAAGTGGATTTATCAGCCTCTTGCGGAAAAGCGGACACTTTGCCAATTAACGAGAAGACGAAGAATGGGGAATCTCTTAAGTGTAGTTCTGTGGAGTTGCAAACTTTGGCCAAGGATTCTGGTTTGGTAATTGAGGACACGAATGAGGAGCCACAAATGGAAAACCCGAGTTTGGATGCAAACTTGCCCAACGCACAAGCTTGCCAGGGTAGTAATAATAACGAGACTAATCTTAATGAGACAACTTCTGTTCATCAAAGTGATGCTCATCGCCCTAACTTGATGAAACCAAATAGTACTGCTCGAACTCATGAGATTTGGCATAGGAAAATGGAAACTAATCCTTAA 1068 0.4064 MDGEIRVWCLEHLLRKSSIKTNLINKLISKISLSNTDYRTKKTIILRTLEDALSEAFIPEYMLQIFEVLEKLLLCHDSSNPNSNSIAAAMKAAYCSIAVESTLKHLDAGISNPIYGKAVKRIWEVRVHDMHNEGSSFLLSDELKEWKSEIEKSLLDGEVRKKLASIPFTRRDAIVKVQAFLAEAWEDLGPSFLESAAKNQLDSSVGGLQMKKQHEKVSPIEILKDNEKAEGKFTTVVDVEKVDLSASCGKADTLPINEKTKNGESLKCSSVELQTLAKDSGLVIEDTNEEPQMENPSLDANLPNAQACQGSNNNETNLNETTSVHQSDAHRPNLMKPNSTARTHEIWHRKMETNP 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01017 355 MobiDBLite consensus disorder prediction 305 340 - -
Vivi3g01017 355 PANTHER MYB TRANSCRIPTION FACTOR 3 345 - -
Vivi3g01017 355 MobiDBLite consensus disorder prediction 305 355 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01017 Vivi-Chr3 17021586 17024543 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01017 8 201 Single Myb Histone (SMH) Gene Family AT1G15720 31.472 5.50e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01017 - K11111 psat:127081272 516.538