Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01007 ATGAATGGCGCAATTGCAACTGATAGAGGTGATTGTTCATCTTACAGTGGTTCTCAAATGCCACATTCATGCAAGAAAGATCCTATCATAGTTGATATATCTCCGGACGTCACACAAAACAGGTCGAACCGTTGCTGTCGCGGTGGCCGCCTCTCTGCCCGAGCTATTGATTCTCTCAATTCGTTGACTTCATTTGAATTCGAAGTAAGAAACTTGGACCAAAAAGAAAATTCAATTGGCGAAGCACCTAATAATGTTACATTCATGGCACCGGGTCCTGGTTACACTTGTAGCCCTTTTATGGTTACCGATCCCTCGGTGTCCTTAGATTTAGGAGGAGTAAGACAAATTCCAGTTATAAGAACTTGGAAGTCAATTTGTACATATTCAAGTTTCTTGGCAAACAAGTCACCAGTATGTTGCGTTTCCTTCTCAACATTTTACAATCCTATCATCACGCCGTGTCGTAATTGCACTTGTGGCGGATGTAGGGAAGCCGATAAAAACACATTGTCTTGCATAAGGCCAAGCGACTCTTTGGGAGGGTCGAATGACGAGAAAAACATAATCCAATGCACGGACCACATGTGTCCGATTCGAGTCCATTGGCATTTCAAGAACAACTATATGAATCAATGGAGGGTGAAGCTTACAATTTCAAACTACAACTTCAATAGAAACTACTCGAATTGGAACGTCCTTGTTCAACATCCTGGTTTGAGCCAAAAAGCAACAGCTTATAGCTTCAATAGCACTAAACTTCCAACTCTTGTGGCAGATGGAGTTGCACTTTTTTGGGGAATAGATTATTTCAACAATGAATTATTGCATTCTGATAAGCAGGGAGTAGGTTCTGTGACAACAGAGATACTATTGGAAAAAGATCAGAATTCATTCACATTGCAAAATGGATGGACATTTCCAAGAAGAATATATTTCAATGGTGAAAACTGTGACATGCCTTTACCTGACACATTTCCTATGTTACCAAATGGTAGCTACATTTTTAGACCAAATTGTCTTGCTTTTATTTTTTCATTAATTTCTCTGTTATTTTTCCTATTAGTACTATAG 1074 0.3939 MNGAIATDRGDCSSYSGSQMPHSCKKDPIIVDISPDVTQNRSNRCCRGGRLSARAIDSLNSLTSFEFEVRNLDQKENSIGEAPNNVTFMAPGPGYTCSPFMVTDPSVSLDLGGVRQIPVIRTWKSICTYSSFLANKSPVCCVSFSTFYNPIITPCRNCTCGGCREADKNTLSCIRPSDSLGGSNDEKNIIQCTDHMCPIRVHWHFKNNYMNQWRVKLTISNYNFNRNYSNWNVLVQHPGLSQKATAYSFNSTKLPTLVADGVALFWGIDYFNNELLHSDKQGVGSVTTEILLEKDQNSFTLQNGWTFPRRIYFNGENCDMPLPDTFPMLPNGSYIFRPNCLAFIFSLISLLFFLLVL 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01007 357 Pfam COBRA-like protein 1 130 IPR006918 GO:0010215|GO:0016020
Vivi3g01007 357 MobiDBLite consensus disorder prediction 7 21 - -
Vivi3g01007 357 PIRSF COBRA 1 357 IPR006918 GO:0010215|GO:0016020
Vivi3g01007 357 MobiDBLite consensus disorder prediction 1 22 - -
Vivi3g01007 357 PANTHER PROTEIN COBRA 1 344 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01007 Vivi-Chr3 16868730 16871168 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01007 1 357 COBRA Gene Family AT3G29810 44.110 1.05e-102 308
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01007 - - ccaj:109801855 548.895
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g01007 3 16868730 16871168 Vivi3g01007 3 16868730 16871168 ECH