Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g01001 ATGGCCATTAGAACAACAAAACCAAACAAACTCTCTCAAAAAACAGTCCTCAAGCAAATCCTAAAAAGATGTTCAAGCCTAACCAAGAAAAACGGCTACGATCAAGACGAAGATGATGTCCAAGATCTTCCTCTTGATGTACCAAAAGGCCACTTCGCAGTTTACGTCGGAGAAAACAGAAGCAGATACATTGTACCGATCACAGTCCTAACTCACCCTCAGTTTCAGTCCCTCCTTCGACAAGCCGAAGAAGAATTCGGCTTCCATCATCACACCGGCCTCACAATTCCTTGCCACGAAGTTGTTTTTCGCTCGTTAACATCAATCATGCTCAGATCATAA 342 0.4327 MAIRTTKPNKLSQKTVLKQILKRCSSLTKKNGYDQDEDDVQDLPLDVPKGHFAVYVGENRSRYIVPITVLTHPQFQSLLRQAEEEFGFHHHTGLTIPCHEVVFRSLTSIMLRS 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g01001 113 Pfam Auxin responsive protein 22 109 IPR003676 GO:0009733
Vivi3g01001 113 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 23 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g01001 Vivi-Chr3 16621231 16622263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g01001 7 112 Calmodulin-binding Proteins AT4G34750 42.056 4.82e-20 77.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g01001 K14488 - csin:114293599 164.466