Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00998 ATGGCTTCAAACTCTGCTCTCTCCAACCCCAAACTCTCTTTCTCTTCTTTTTCTTCTTCTTCTTCCTCTCTCAACCCTTCTTTTTTCCACAACAAACTTCTCTTCTCAAAACCAAACCTCAAAACCACACTCTCCCATTCCCGCAACCACAAACCACCCTCCTCATCCACCAACACCAACCCTAACACCACAGACACATTCCCTTTCCATAACCTAACCGCCAACGATAACGAAAAGCCGCGTGAAGAATGCGGCGTCGTCGGTATCTACGGCGACGCCGAAGCTTCTCGCTTATGTTACCTAGCTCTCCACGCTCTCCAACACCGTGGTCAAGAAGGTGCTGGAATTGTCTCCGTCGACAATAACGTCCTTATAACCGTCACCGGCGTTGGACTAGTCTCCGAAGTTTTTAACGATACGAAACTCCGTCAATTACCGGGAACTTTAGCCATCGGTCATGTTCGTTACTCTACAGCAGGCCAATCTATGCTGAAAAACGTTCAACCTTTTGTTGCAGGTTACCGTTTTGGTTCCGTTGGTGTTGCTCATAACGGTAATTTCGTGAATTACCGTTCCTTGAGAAACACGCTTGAAGAATCTGGTTCGATTTTTAATACGAGTTCTGATACTGAGGTTATTCTTCATCTTATCGCGACTTCGAATCAGAAGAGTTTTATAACTAGAGTTATTGATGCTTGTGAGAAGGTGAAAGGTGCTTATTCGCTTGTGTTTGTTACTGAGGATAAGCTTGTTGCTGTGAGAGATCCTTACGGTTTTCGGCCTTTGGTTATGGGAAGAAGAAGTAATGGTTCTGTTGTTTTCGCTTCGGAAACGTGTGCGCTTGATTTGATTGAAGCTAGTTATGAAAGGGAGGTTTATCCTGGTGAAATTGTGGTTGTGGATGAAACTGGTGTTCAATCTTATTCTCTGGTTTTTCATCCGGAGCCGAAACAATGTATTTTTGAGCATATTTATTTCTCTTTGCCGAATTCTGTTGTTTTTGGGAAATCTGTTTATGAATCGAGAAGATTGTTTGGTGAGATACTGGCTACTGAGAGTCCTGTTGATTGTGATGTTGTTATAGCTGTTCCTGATTCTGGTGTTGTTGCTGCGCTTGGTTATGCTGCGAAAGCTGGTGTTCCTTTTCAGCAGGGTTTGATTAGGTCACACTATGTTGGTAGAACTTTCATTGAGCCGTCTCAGAAGATTAGAGATTTTGGTGTGAAGTTGAAGCTTTCGCCGGTTCGGGCTGTTCTGGAAGGGAAAAGGGTTGTGGTTGTTGATGATTCTATTGTGAGGGGGACAACATCATCTAAAATTGTGAGGCTGTTGAAAGAAGCTGGTGCTAAAGAAGTTCATATGAGAATTGCATGTCCACCAATTATTGGGTCATGTTACTATGGTGTGGATACACCTAGCCCTGATGAGTTGATATCTAATAGGATGAGTGTGGATGAGATTAAGGAGTTTATTGGTTGTGATTCACTTGCTTTTTTGCCTATGGATAGTTTGAAGAAGCTGTTGGGTGATGATTCTTCTAATTTCTGTTATGCTTGTTTCACTGGGAATTATCCTGTTGAGCCTAATGAACTCAAAGTCAAGAAGGTTGTGGATGGTGGATTAAATGGATCTGTTCAAGGTAACCCAAATCAGAAAGAGGTGAAGATTGTTGGAGTTTGA 1680 0.4268 MASNSALSNPKLSFSSFSSSSSSLNPSFFHNKLLFSKPNLKTTLSHSRNHKPPSSSTNTNPNTTDTFPFHNLTANDNEKPREECGVVGIYGDAEASRLCYLALHALQHRGQEGAGIVSVDNNVLITVTGVGLVSEVFNDTKLRQLPGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNFVNYRSLRNTLEESGSIFNTSSDTEVILHLIATSNQKSFITRVIDACEKVKGAYSLVFVTEDKLVAVRDPYGFRPLVMGRRSNGSVVFASETCALDLIEASYEREVYPGEIVVVDETGVQSYSLVFHPEPKQCIFEHIYFSLPNSVVFGKSVYESRRLFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIIGSCYYGVDTPSPDELISNRMSVDEIKEFIGCDSLAFLPMDSLKKLLGDDSSNFCYACFTGNYPVEPNELKVKKVVDGGLNGSVQGNPNQKEVKIVGV 559
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00998 559 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 84 308 IPR029055 -
Vivi3g00998 559 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 84 525 IPR029055 -
Vivi3g00998 559 MobiDBLite consensus disorder prediction 1 22 - -
Vivi3g00998 559 Pfam Glutamine amidotransferase domain 162 281 IPR017932 -
Vivi3g00998 559 CDD PRTases_typeI 341 479 IPR000836 -
Vivi3g00998 559 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 84 303 IPR017932 -
Vivi3g00998 559 SUPERFAMILY PRTase-like 319 530 IPR029057 -
Vivi3g00998 559 NCBIfam amidophosphoribosyltransferase 84 525 IPR005854 GO:0004044|GO:0009113
Vivi3g00998 559 CDD GPATase_N 84 334 IPR035584 -
Vivi3g00998 559 Hamap Amidophosphoribosyltransferase [purF]. 83 524 IPR005854 GO:0004044|GO:0009113
Vivi3g00998 559 MobiDBLite consensus disorder prediction 43 66 - -
Vivi3g00998 559 Pfam Phosphoribosyl transferase domain 341 454 IPR000836 -
Vivi3g00998 559 PIRSF Pur1 80 539 IPR005854 GO:0004044|GO:0009113
Vivi3g00998 559 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 82 531 - -
Vivi3g00998 559 Gene3D - 343 507 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00998 Vivi-Chr3 16587359 16589292 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00998 71 546 PRT Gene Family AT4G34740 81.198 0.0 803
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00998 K00764 - gmx:100791919 827.009