Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00957 ATGGTCTCTAGTGGCAGTGTGGAGTCCTTCAACAATGTGTCACAATTCTCCACTCAAAATGGTTTGGAAAATATTAAGCTTGATGAAGGGCAAAATTTTATTAAGAAAAAATCTCGCACACCATTTTCAAAGGAAGAAGACACACTTCTAATTCAACCATGGCTCAACATGTCAAAGGATCCAATTGTAGGAGTTGACCAAAAAGCCAGTGGTTTTTGGTTAAGGGTTAGAGAAACCTACAACACCTACCATGACCAACTCTTAAAGAGGGAAAATGGTCAACTAAAAGCTCGATGGCACCGATTCAATGGTCGTGTTCAAAAGTTTTTAGGCTGCTACACATCTATTTTTAATAAAAGAAAAAGTGGAGCTTGTGAAGATGAACCAAAATGGAAGGGAGGTTCAATTGAAAACTCTTCAAAAAGAACAAAGGTTAATAATTGTGGGGAGTATTCATCATCCTCTAACCTATGGACGCCCATCGATTGTTCAGACTATGATCAAGCATCACCTATAACCCGTCCAATGGAACAACAGGAAGCAAAAAAGAATAGCAAAGGAAAATCAAATGCAACATCTTTTAATGTTGATTTAAGTGCCATGGAAAATGTTGTAACTGAAAGAAATGCTATCATGATAAGGATGGCTAAGGCAAGGGAAAGTGATGCTATTGCAAGGGTGAAAGAAGCTAGTGCTAGGGAGTTAAAGGCAAAAGCAATGAAAGCAAAAGCAAAATCAAGGGAGGATGAGAATGAGACCAGATGGTATGAAATCCTTTTCAAGGATACATCTACTATGAATGAGACACAACTTCAAGATCATGAATTTTATTGTAATCATATTAAGGTGAAGTTATGA 858 0.373 MVSSGSVESFNNVSQFSTQNGLENIKLDEGQNFIKKKSRTPFSKEEDTLLIQPWLNMSKDPIVGVDQKASGFWLRVRETYNTYHDQLLKRENGQLKARWHRFNGRVQKFLGCYTSIFNKRKSGACEDEPKWKGGSIENSSKRTKVNNCGEYSSSSNLWTPIDCSDYDQASPITRPMEQQEAKKNSKGKSNATSFNVDLSAMENVVTERNAIMIRMAKARESDAIARVKEASARELKAKAMKAKAKSREDENETRWYEILFKDTSTMNETQLQDHEFYCNHIKVKL 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00957 285 PANTHER - 19 281 - -
Vivi3g00957 285 Pfam No apical meristem-associated C-terminal domain 127 270 IPR029466 -
Vivi3g00957 285 Coils Coil 232 252 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00957 Vivi-Chr3 15915284 15916226 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00957 13 194 Glutathione S-transferase Gene Family AT5G41240 30.435 2.63e-15 73.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00957 - K00799 vvo:131657626 567.385