Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00947 ATGGCTTTTGTTGCATTATCACAAATTCTTTTGGTGCTCACTTCAATAATACTTGCTATATGTCTTTGCTTGCTCACAATACTAACATATTTTTGGTGGATTTTACCAAACCATAAACTTCAAAACCTTAAGAAATGTGGATTTGATGGACCAACACCAAGTTTTCCATTTGGAAACATTAAAGAAATGAAAAGAAATTCTTTCTTTTCTTCTTCGCTTGATATCACTCATAATATTCACTCTACCGTTTCCCCTTACTATTCTTCATGGCAAAAATCTTTTGGGAAAGTTTTTATATATTGGTTAGGGGTAGAACCATTTTTATACGTTGCAGATCCAGAATTCTTGAAGAAAATGTCTGGAAAAGTTATGGCCAAGAAATGGGGAAAACCAAGTGTTTTTAGAAAAGATAGAAATTCAATGTTTGGAAATGGTTTGGTGATGGCAGAAGGCAGCATATGGGTACATCATCGACATGTTATAGCCCCAACATTTACTCCAATTAATCTTAAGACAATGGCAAGCATGATGATTGATTCGACAAAGAAAATGATCAAAAGATGGGATTCCGAAATTAACTCCGGCCACCTTGAACTCGATCTCGAAAGCGAGATTGTAGCAATGGCCGGAGAAATCATAGCGAGAGCAAGCTTTGGAATAGATGATGAAAATGGAAAAATAGTTTTTGATAAACTAAGAACTTTGCAAATGACCCTTTTTAAGACCAATAGATATGTAGGGGTCCCCTTTGGAAAATTCTTTAATTTTACGAAAACTTTAGAAGCCAAGAAAATTGGTGAACAAGTTGACAAGCTCTTGTTATCCATAATAGAAAGTAGGATGAATTCAAATGATAAGAAACAATATGAACAAGATTTGTTGGGTCATTTGTTAAAAGAAAATAATGAGGTTGATGGACAAATGAACAAGGCTTTAACAAAAAAGGAGTTGGTTGATGAGTGCAAGACATTTTTCTTTGGTGGATATGAGACTACATCACTTTCAATCACATGGACTTTATTGCTTCTAGCTTTGCATCAAGATTGGCAAAACCAATTGAGAGATGAAATTAAACAAGTTATTGGTAATATTGAAGAACTAGATATCAACTTGCTTTCTGATTTAAAGAAGATGAAATGGGTGATGAATGAAGCACTTAGACTCTACCCACCATCTCCGAATGTGCAAAGGCAAACAATGGAAGACATTCAAATAGATAATGTAAAGGTTCCTAAAGGGACCAACATTTGGATTGATGTTGTAGCAATGCACCATGATGTTACATTATGGGGGAATGATGCCAACAAGTTCAAACCAGAGAGATTTATGAATGATGCAAATGGGGAATGCAATCACAAAATGGGATACTTGCCATTTGGTTTTGGAGGGAGAGCATGTGTTGGTAGGAACTTGACTTTCATGGAGTATAAGATAGTGTTAACCCTACTTCTCTCTAATTTTAAGTTTAAACCCTCCCCTAGTTATCACCACTTTCCTACTATTATGTTGTCTCTTAGACCTAGTCATGGACTTCCTCTCATAGTTCAATCATTGTAG 1557 0.3532 MAFVALSQILLVLTSIILAICLCLLTILTYFWWILPNHKLQNLKKCGFDGPTPSFPFGNIKEMKRNSFFSSSLDITHNIHSTVSPYYSSWQKSFGKVFIYWLGVEPFLYVADPEFLKKMSGKVMAKKWGKPSVFRKDRNSMFGNGLVMAEGSIWVHHRHVIAPTFTPINLKTMASMMIDSTKKMIKRWDSEINSGHLELDLESEIVAMAGEIIARASFGIDDENGKIVFDKLRTLQMTLFKTNRYVGVPFGKFFNFTKTLEAKKIGEQVDKLLLSIIESRMNSNDKKQYEQDLLGHLLKENNEVDGQMNKALTKKELVDECKTFFFGGYETTSLSITWTLLLLALHQDWQNQLRDEIKQVIGNIEELDINLLSDLKKMKWVMNEALRLYPPSPNVQRQTMEDIQIDNVKVPKGTNIWIDVVAMHHDVTLWGNDANKFKPERFMNDANGECNHKMGYLPFGFGGRACVGRNLTFMEYKIVLTLLLSNFKFKPSPSYHHFPTIMLSLRPSHGLPLIVQSL 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00947 518 SUPERFAMILY Cytochrome P450 78 515 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 Pfam Cytochrome P450 80 493 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 Gene3D Cytochrome P450 31 517 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PANTHER CYTOCHROME P450 FAMILY MEMBER 25 510 - -
Vivi3g00947 518 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PRINTS E-class P450 group I signature 456 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PRINTS E-class P450 group I signature 466 489 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PRINTS P450 superfamily signature 466 477 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PRINTS P450 superfamily signature 457 466 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Vivi3g00947 518 Coils Coil 350 370 - -
Vivi3g00947 518 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 459 468 IPR017972 GO:0005506|GO:0016705
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00947 Vivi-Chr3 15641941 15644777 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00947 1 518 Cytochrome P450 AT5G52400 52.941 0.0 592
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00947 - - gmx:100802882 738.413