Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00841 ATGGAAAACACCGACCATTATGATTCCAACGACTATCGATGCCGTGACAGTGGTACATCTGATTCTAAATCGGACAATGGTCAGGATGACAGTAATTCGGTGTCCAGTGCGTACCAAGGTTCAAGTGATGGTGATGGCGATGGAGATGGTGATAGTCACAATGAAAATTTTGTTGAATTTGATGCAGTTGTAGGTGATAGAACAGTGAAAATTGATGCCCTTACTCGTGATGAAATTCGTGCTATGGAATTCGGTACAGTTGATGAAGCTAATGTGTTTTATTTCAAGTATGCTAAATGTAAAGGGTTTGCCATTAGGAAAAGTGATGTTAGGACAAGATCGACTGAGGGTGGACAAACAATTATAATGAGGCAGTTTGTATGCAATAAACGCGGTCTAAGAGATACAAAACACTTAAGGAGGCTTGATAGAAAAAGAGAACACAGACCTACGACCCGCACTAATTGTCCCGCTAGGCTTCGTGTGCATTACAACCCCCAGAAGGATAGTTATGTAGTGTCATGA 525 0.4133 MENTDHYDSNDYRCRDSGTSDSKSDNGQDDSNSVSSAYQGSSDGDGDGDGDSHNENFVEFDAVVGDRTVKIDALTRDEIRAMEFGTVDEANVFYFKYAKCKGFAIRKSDVRTRSTEGGQTIIMRQFVCNKRGLRDTKHLRRLDRKREHRPTTRTNCPARLRVHYNPQKDSYVVS 174
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00841 174 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 18 170 - -
Vivi3g00841 174 MobiDBLite consensus disorder prediction 24 42 - -
Vivi3g00841 174 MobiDBLite consensus disorder prediction 1 55 - -
Vivi3g00841 174 MobiDBLite consensus disorder prediction 1 23 - -
Vivi3g00841 174 Pfam FAR1 DNA-binding domain 93 173 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00841 Vivi-Chr3 13737803 13738327 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g00841 FAR1 2e-15 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00841 - - vvo:131657583 347.821