Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00790 ATGGTGCACCCAGATAATATTTCAAGTAAATTAGCTTCTTTAGTCGATGTTAGTGCGAGTATCGATGAGGTGGTCGCAAATGTGGTAGATATCGGAGGTGACTTTATTAGCAAGCATGACTTTGATGATCGTGAAAGCATGCTAATATGGATTCGTCGGAAAGCAGTTAACCTTGGATTTGGTGTGGTAATCGGAAGATCAGATAATGGTACCGCAAGAAGAAACCCGTTTGTTACAATGTTGTGCGAAAGAAGCGGGAAATATAATCCTCCTCTAAAGAAGTTTAAAAAAGACGACACGAGTACTAGAAAATGCGAGTGTCCATTTAAAATTTGTTGTTATATGTTAGCTAGGAAGAAGTGGAGAAGCTCTGTTATTTGTGGTTTGCATAACCATGAATTGTGCGTAAAATTACAAGGCCACCCTATGGCATGTCGGCTCAATCCGGTTGAGAATGCATCTATTAAAGATATGTCCTTGAATTTTGTCCAACCGAAAAATATACTCGCCACATTGAAAAGGAAGGAACCCGACAACATATCAAACATAAGGCAAGTGTATAATCAATGGTACCGCAATAATAAGGCGAGTAGGGGTGATAGGAACGATTTTGAAAGGTTGAACAACACCGAGAAGGAATCAAATATCGAAAAGTCAAGATTAGAACCTCCAATAGATTTAGCCGGCGATAGTTCTTTTGATGTATTTATGTAG 714 0.3894 MVHPDNISSKLASLVDVSASIDEVVANVVDIGGDFISKHDFDDRESMLIWIRRKAVNLGFGVVIGRSDNGTARRNPFVTMLCERSGKYNPPLKKFKKDDTSTRKCECPFKICCYMLARKKWRSSVICGLHNHELCVKLQGHPMACRLNPVENASIKDMSLNFVQPKNILATLKRKEPDNISNIRQVYNQWYRNNKASRGDRNDFERLNNTEKESNIEKSRLEPPIDLAGDSSFDVFM 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00790 237 MobiDBLite consensus disorder prediction 201 225 - -
Vivi3g00790 237 Pfam Transcription factor AFT 93 134 IPR014842 GO:0000981|GO:0036086
Vivi3g00790 237 MobiDBLite consensus disorder prediction 201 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00790 Vivi-Chr3 12956131 12956844 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Vivi3g00790 AFT 4.8e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00790 - - vvo:131648473 317.005