Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00786 ATGTATGATTTGGAAGAAAATATTCTATTTACAATGTTAGAAAGCGGTGATTACAAGAAAAAGAATGATTTTATGGTTGTTGTTAATGATGATGATGATGATGTTGTTGATGTTGATGATGATGATAAATCAGAGGGTTTTAAGAATCTGAAACCAATTCCAAAGGGTAAGCCTCCAAGGCATGTGTCTGGTATGAGACACAGCCTTAGCTCTACCAGATTGACCATGGCTGCAGCAGATTTGGGTGTAGATGCCGAGGTAACTGGAAGTAAGTCATCTTCTGAAGACAAGACAGATTATCTACCCATATATCGGTCAGGAAGTTGTGCTGAAAGAGGACCTAAACAATATATGGAAGATGAACACATATGTATAGATGATCTTACCCAACACATAGGTTCTGCTTCAAATCTTCCTTTTCCTGGAGCTTTCTACGGGGTGTTTGATGGTCATGGAGGAACAGACGCTGCTTTGTTTGTAAGAAATAACATCCTTAGACTCATTGTTGAGGACTCACAGTTTCCAACTTGTGCGGGGAAAGCAATTACAAGTGCGTTTATGAAAGCTGATTATGCGTTTGCTGATTCCAGTTCACTTGATATCTCCTCTGGCACCACTGCTTTAACTGCTCTTGTATTTGGGAGGAACATGATAATTGCAAATGCGGGGGATTGTCGAGCTGTATTGGGGAGACGAGGTAGAGCAATCGAGATGTCAATAGACCAGAAACCAAATTGCATTTCAGAAAGGCTAAGGATTGAAAAACTTGGTGGAGTGGTATATGATGGATACTTGAACGGCCAATTATCTGTTTCCCGTGCCCTAGGAGACTGGCACATGAAGGGACCTAAGGGTTCCGCATGCCCTTTGAGTTCCGAGCCAGAGTTGCAAGAAGTCTGTCTGACTGAGGATGACGAGTTCTTGATTATGGGCTGTGATGGCTTGTGGGATGTAATGAGTAACCAATGTGCCGTGACCATGGCAAGAAAAGAGTTGATGATACATAATGATCCTCAAAGGTGTTCAAGAGAGTTGGTCAGAGAGGCTCTTAAGCGTAATTCGTGTGATAATTTAACAGTTATCGTCGTATGTTTCTCCTCAGATCCTCCTCCTAGAATAGAGATACCTCCTTCTCGAGTCAGGAGGAGTATATCAGCAGAAAGTCTCACTTTACTTAAGGGTGTATTAGAGTGTTAG 1197 0.4194 MYDLEENILFTMLESGDYKKKNDFMVVVNDDDDDVVDVDDDDKSEGFKNLKPIPKGKPPRHVSGMRHSLSSTRLTMAAADLGVDAEVTGSKSSSEDKTDYLPIYRSGSCAERGPKQYMEDEHICIDDLTQHIGSASNLPFPGAFYGVFDGHGGTDAALFVRNNILRLIVEDSQFPTCAGKAITSAFMKADYAFADSSSLDISSGTTALTALVFGRNMIIANAGDCRAVLGRRGRAIEMSIDQKPNCISERLRIEKLGGVVYDGYLNGQLSVSRALGDWHMKGPKGSACPLSSEPELQEVCLTEDDEFLIMGCDGLWDVMSNQCAVTMARKELMIHNDPQRCSRELVREALKRNSCDNLTVIVVCFSSDPPPRIEIPPSRVRRSISAESLTLLKGVLEC 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00786 398 PANTHER PROTEIN PHOSPHATASE 2C 91 363 IPR015655 GO:0004722|GO:0006470
Vivi3g00786 398 Pfam Protein phosphatase 2C 105 357 IPR001932 -
Vivi3g00786 398 CDD PP2Cc 104 365 IPR001932 -
Vivi3g00786 398 MobiDBLite consensus disorder prediction 33 65 - -
Vivi3g00786 398 FunFam Probable protein phosphatase 2C 22 90 368 - -
Vivi3g00786 398 SUPERFAMILY PP2C-like 100 366 IPR036457 -
Vivi3g00786 398 SMART PP2C_SIG_2 120 365 IPR001932 -
Vivi3g00786 398 SMART PP2C_4 95 363 IPR001932 -
Vivi3g00786 398 ProSitePatterns PPM-type phosphatase domain signature. 144 152 IPR000222 GO:0043169
Vivi3g00786 398 ProSiteProfiles PPM-type phosphatase domain profile. 105 365 IPR001932 -
Vivi3g00786 398 Gene3D - 83 368 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00786 Vivi-Chr3 12917537 12920127 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00786 9 397 PP2C-type Phosphatase Gene Family AT2G33700 70.332 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00786 K14803 - gmx:100778015 625.935
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00786 3 12917537 12920127 Vivi3g00786 3 12917537 12920127 ECH