Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00760 ATGTCATTCAACAACCACCAAGCATCATCCTCCACTCATGGTCGTCGCCCAGGGCGTCCACTTGGCTCCAAGAACAAACCCAAGATGCCTATCATAGAAAAACATGACAATCCTAATGCATTAAATTCCCATGTCCTTGAGATCACTTCTGGATCTGACGTGTCACAAAGTCTCTTTGATTATGTTCATCGTAAAGGGAGGGGAATCAATATCCTCTGTGGAAATGGAATAGTGACGCATGTTAGGCTTCTTCAATCCCCAGGAAATGTTGTATTCCTTCAAGGAAGTTTTGAGATACTTTCAATATCAGGAACTGTTATTCCTTCGGAAACAATACCGAGTGCAGGAGGATTGGTAGTTTATTTAATGGGAAAATCGGGAGAGGTGATTGGGGGGAGTGTCATGTCCCCTCTAGTTGCTTCGGGTTCAGTGACTTTGATGGCTTCTTCTTTTGCAAGCACTGCATCTGAAAAGATTCCTTTAGTTACCACTCATTTTATAGAGAATGAGCCATCATGCCTTAATGGAGATAGACATGTGACTAAAGCTGATAGTGGCTTCGCTTCGTCAATGCTGGAGAATCAACATTCCAAATGA 597 0.4271 MSFNNHQASSSTHGRRPGRPLGSKNKPKMPIIEKHDNPNALNSHVLEITSGSDVSQSLFDYVHRKGRGINILCGNGIVTHVRLLQSPGNVVFLQGSFEILSISGTVIPSETIPSAGGLVVYLMGKSGEVIGGSVMSPLVASGSVTLMASSFASTASEKIPLVTTHFIENEPSCLNGDRHVTKADSGFASSMLENQHSK 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00760 198 Pfam Plants and Prokaryotes Conserved (PCC) domain 43 152 IPR005175 -
Vivi3g00760 198 MobiDBLite consensus disorder prediction 1 36 - -
Vivi3g00760 198 ProSiteProfiles PPC domain profile profile. 38 172 IPR005175 -
Vivi3g00760 198 MobiDBLite consensus disorder prediction 1 16 - -
Vivi3g00760 198 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 12 170 IPR014476 GO:0003680
Vivi3g00760 198 CDD DUF296 42 151 IPR005175 -
Vivi3g00760 198 Gene3D - 42 168 - -
Vivi3g00760 198 SUPERFAMILY AF0104/ALDC/Ptd012-like 38 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00760 Vivi-Chr3 12713495 12714091 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00760 9 161 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 50.909 1.68e-44 148
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00760 - - vvo:131657567 290.426