Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00759 ATGTCATACAACAATCACCAAGCATCATCCTATACTTCTGGTCGTCGCCCTCCAGGGCGTCCACTTGGTTCCAAGAACAAACCTAGGATGCCTATCATAGAAAAGCATGACAATCCTAATGCACTAAATTCTCATGTCTTTGAGATCACTTCCGGATCTGACGTGTCACAAAGTCTCTTTGATTACGCTCACCGTCAAAGGAGGGGTATCAATATCCTTTGTGGAAATGGAATAGTGACGAATGTTAGGCTTCTTCAACCCATGGGAAACATTGTAATCCTTCAGGGAAGTTTTGAGATACTTTCAATATCAAGAACAATTTTTCCTTCGGAAACATTACCTAATGCAGGAGGATTGGTAGTTTATTTTATGGGAACATCAGGACAGGTAATTGGGGGGAGTGTCATGCCCCCTCTAGTGGCTTCAAGCTCAGTGACTTTGATGACTACTTCTTTTGCAAACAATGCATCTGAAAAGATGTCTTTGGTGACCAATGATCTGATAGAACATGAGCCCTCATGCCTAATTAAAGTTAGACATGTGACTAAAAGTGGTAGTGGTGGAGAACCAACATCTGAAATGATAAACATGATGAGTTCCAAAACCAATTATTTCTCATCTTCTACCCAAGGTCGTATATTGGAATGA 648 0.409 MSYNNHQASSYTSGRRPPGRPLGSKNKPRMPIIEKHDNPNALNSHVFEITSGSDVSQSLFDYAHRQRRGINILCGNGIVTNVRLLQPMGNIVILQGSFEILSISRTIFPSETLPNAGGLVVYFMGTSGQVIGGSVMPPLVASSSVTLMTTSFANNASEKMSLVTNDLIEHEPSCLIKVRHVTKSGSGGEPTSEMINMMSSKTNYFSSSTQGRILE 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00759 215 CDD DUF296 43 152 IPR005175 -
Vivi3g00759 215 Gene3D - 43 168 - -
Vivi3g00759 215 Pfam Plants and Prokaryotes Conserved (PCC) domain 44 153 IPR005175 -
Vivi3g00759 215 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 13 173 IPR014476 GO:0003680
Vivi3g00759 215 MobiDBLite consensus disorder prediction 1 32 - -
Vivi3g00759 215 PIRSF ESCAROLA 2 213 IPR014476 GO:0003680
Vivi3g00759 215 SUPERFAMILY AF0104/ALDC/Ptd012-like 39 159 - -
Vivi3g00759 215 ProSiteProfiles PPC domain profile profile. 39 173 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00759 Vivi-Chr3 12700310 12700957 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00759 15 154 AT-hook Motif Nuclear Localized (AHL) Family AT3G60870 55.000 3.93e-43 144
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00759 - - vvo:131657567 427.943