Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00757 ATGTCATACAACAACCACCAAGCATCATCCTCCACTCCCGGCCGTCGTCCTCCAGGGCGTCCACTTGGCTCCAAAAACAAACCTAAGATGCCTATCATAGAAAAACATGACAATCCTAATGCACTAAATTCTCATGTCCTAGAGATCACTTGCGGATCTGACATCTCACAGAGTCTCTTTGATTACGCTTGTCGTCAAGGGAGGGGCATCAATATCCTCTGTGGAAATGGAATAGTGGCTAATGTTAGACTTCTTCAGCCCACGGGAAATGTTGTAATGCTTCAAGGAAATTTTGAGATACTTTCGATATCAGGGACAATTTTTCCTTCGGGAACACCATCAAGTGCAGGAGAATTGGTAATTCATTTAATGGGAACGTCAGGGCAGGTGATTGGGGGGACTGTCATGCCTCCTCTAATGGCATCAAGTTCAATTTCTTTGATGGCTGCTTCTTTTGCAAACATTGCATCTGAAAAATTTTCTTTGGTGACCAATAATCTGATAGAACATGAGCCCAGAAATGTGATTAAAAGTGATACTGGCTCGCTCAATGCTGGAAAATCTATATCTCAAATGATAAACAATATGAGTTTCAACTCCAATTATCTCAAATGA 615 0.4163 MSYNNHQASSSTPGRRPPGRPLGSKNKPKMPIIEKHDNPNALNSHVLEITCGSDISQSLFDYACRQGRGINILCGNGIVANVRLLQPTGNVVMLQGNFEILSISGTIFPSGTPSSAGELVIHLMGTSGQVIGGTVMPPLMASSSISLMAASFANIASEKFSLVTNNLIEHEPRNVIKSDTGSLNAGKSISQMINNMSFNSNYLK 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00757 204 MobiDBLite consensus disorder prediction 1 37 - -
Vivi3g00757 204 SUPERFAMILY AF0104/ALDC/Ptd012-like 39 160 - -
Vivi3g00757 204 ProSiteProfiles PPC domain profile profile. 39 173 IPR005175 -
Vivi3g00757 204 Pfam Plants and Prokaryotes Conserved (PCC) domain 44 153 IPR005175 -
Vivi3g00757 204 CDD DUF296 43 133 IPR005175 -
Vivi3g00757 204 Gene3D - 43 169 - -
Vivi3g00757 204 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 11 166 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00757 Vivi-Chr3 12607487 12608101 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00757 9 162 AT-hook Motif Nuclear Localized (AHL) Family AT1G76500 52.727 2.04e-47 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00757 - - vvo:131657567 278.87