Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00674 ATGCTAGTGTTCCATTACATCGTTATCTTCTGTGAAGCTGTTGCTATCTATGGTGTTATTGTGGCTATTATCCTGCAGATAAAACTAGAAAGTGTTCCAAAAGCAAGTATCTATGAACCAGAATCTCTTAGAGCTGGATATGCAATCTTTGCTTCTGGGCTTATTGTGGGCTTCGTAAATCTTGTTTGTGGGTTGTGTGTAGGAATAATTGGAAGTAGCTGTGCATTGTCTGATGCTCATAACTCCTCCCTCTTTGTGAAAATTCTTGTGATTGAGATCTTTGGCAGTGCACTTGGCCTATTTGGAGTTATTGTTGGAATTATTATGTCGGCTCAAGCAACATGGCCCTCAAAAATTTAG 360 0.3944 MLVFHYIVIFCEAVAIYGVIVAIILQIKLESVPKASIYEPESLRAGYAIFASGLIVGFVNLVCGLCVGIIGSSCALSDAHNSSLFVKILVIEIFGSALGLFGVIVGIIMSAQATWPSKI 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00674 119 PRINTS Vacuolar ATP synthase 16kDa subunit signature 61 87 IPR000245 GO:0033179|GO:0046961|GO:1902600
Vivi3g00674 119 PRINTS Vacuolar ATP synthase 16kDa subunit signature 5 29 IPR000245 GO:0033179|GO:0046961|GO:1902600
Vivi3g00674 119 PRINTS Vacuolar ATP synthase 16kDa subunit signature 88 111 IPR000245 GO:0033179|GO:0046961|GO:1902600
Vivi3g00674 119 Pfam ATP synthase subunit C 50 109 IPR002379 GO:0015078|GO:0033177|GO:1902600
Vivi3g00674 119 CDD ATP-synt_Vo_c_ATP6F_rpt2 45 109 - -
Vivi3g00674 119 Gene3D - 2 116 IPR035921 -
Vivi3g00674 119 SUPERFAMILY F1F0 ATP synthase subunit C 42 110 IPR035921 -
Vivi3g00674 119 PANTHER V-TYPE PROTON ATPASE PROTEOLIPID SUBUNIT 8 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00674 Vivi-Chr3 11157939 11158512 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00674 8 118 Primary Pumps ATPases(2) AT2G25610 89.189 5.97e-66 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00674 K03661 - zju:107421253 197.593