Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00672 ATGTACTCAAATCCTCCTATGGATTACCCTTCTCATACACATTCATATCATCCATGGAGTATTCCTCCTACCTATCTCACAAACCCCTCTTTCACAAACCCCTCTTTCACAACTCCTACCACAACCTCATTTCCATCTTTCCCATGGGAAATCTTTACACCTTCTTACACTCATGGATCATCATCCCCAAATTTGTATCCACATCATGGATATTCACCACATCATTCATATATTTATCCATCTCATTCACATGTTTATCCAAATTACTATAACAATATTCATGAACCACACACGCACCACACAACAGAACAACTTTTGACCTCACACCCACTATTCACCCAACATCAAACAGTCAACGATTCCACTTATATGGGTAGCTACTACCAAGAAGCAACACATCAAATTCACTATCCAGAAATTTCTCTAGTGAAAAAGAAATCATGTCAGTTGTCTAAGTTGAGATTCTCCTCCTTATTATCGGTTAAAACCGACAAAAACAAAAGAGGAAAAAGAAGAACTATAACCAGAAAAGAAAAGCGAGCTTCTGAACCAAAAACTCTGAGATTTTCGACGACATTACCAACCATTTCATCAGAACCACAAATGCTCGATTCAAAAACCGAACCTCCCGACAACAACGACCTCACGGTGGATGACTACAACGAAGCTCACGATATCGTTCCTACCTCCGATTTTCAACTGATTCGTTCACTCCCTGTTTTTAACCCCAATTTCGGTTCTTCGTTCGCGAAAACTTGGAACTCCGATTTCAACCTTGACCACCGAAGAAATCTCGACCAGGAAACTGAAGCTATCGTCGTTACGACTCCTCAATTGAAGCAGAAAGGTGAAGCAGTTGGTTTTGAAGCTGATTTAGGTGTTAGGATGACTCCTGGATCCACTGATCCAACCAATGGTTCTTATTTGACATATGTATCTAAAGATTTCTCATCCCTCACTCCCATCCTCTCCTGCGAAGACAACCCTCCTCTCTCGGAATCCCAAGCCGTCGGCGTCGTCGCTTCCTCCCAAGCCAATTACATGCGCGTAGTCGTCCAGTCTGTCCCCGAAGATTCTTCCGCAAGGGTAGAACTTTTGTGCATTGTGAGGGCGCTGCTGAAGAAGATAAAGCGTAGGGTTACGGTTGGGGATAAGGTTCTAATAGGTTTTGTTGATTGGGTGGATCATAGGGGCATGATTGAGAACGTGTTTCTCATGTTTCTGAGAAGTAATAGTGCTGTTGTTTTTGCTTATGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGTAAAGTATTCCCTGGTGAGGTTGTTGTGGTTGACAGTAACGGGATTCAATCGCTTTGTCTTATGTCTCATCCGCAGCCGAAGCAATGTATTTTCGGGCATATTTACTTTGCTTTGCCTAATTCTATTGTTTTTGGTAGGTCTGTGTATGAGTCGCGTAGACAATTCGGTAAGGTGCTTAATACTGAGAGCCCTATTGATTGTGATGTTGTGATAGCAGTTCCTGATTCTAGTGTTGTTGCTGAGCTTGGTAATGCTGAAAAAGCCGGTGTTCCTTTTCAACAAGGGTTTATTAGGAAGTTCTCAATGAAGGAACAAGCATCTATAGTTTGGCAGTTTCTTTGCAGTATTCAAGTGAATATGATTGCAATATTTCTTCCATGGCGTTCAACATCTAGATCACCTGATGAATCTCATAATTTATGGAAATGCTTAAGCAATATAGTGCCAAAGGAAAAGCTTCTTCAAAAGGTTATCTTCACCTGGATGGAAGGGCGGAGTAGTGTTAACATAGTTGAAAACTGTGTAGATCATTCTCAGATTCAATATAGTTCTTGTCATTTAGCCCATCAAACTGCAAAAATAAAACAATTTCTTCGACGCAAATGCGGAAAGGAAATAGATATATGGAGTGTTGGAGTAATATTATATCTCTTACTTACTGGTGTTTCCCCATTTTGGGTTGAGACTGAAAAGGGAATATGTGATACAATATTGAAGCAATTCAGAGGTATGAATAAACTAGAGAAACTTGCATTGAAGGATTTATTTTCAATTCTGAAGTTTGTGTTGCAAATAATCAGTGACAATTTGTTATTCAAGCATTGGGATCCAGGAACAATATCTCTATTCTCATATTGA 2154 0.4006 MYSNPPMDYPSHTHSYHPWSIPPTYLTNPSFTNPSFTTPTTTSFPSFPWEIFTPSYTHGSSSPNLYPHHGYSPHHSYIYPSHSHVYPNYYNNIHEPHTHHTTEQLLTSHPLFTQHQTVNDSTYMGSYYQEATHQIHYPEISLVKKKSCQLSKLRFSSLLSVKTDKNKRGKRRTITRKEKRASEPKTLRFSTTLPTISSEPQMLDSKTEPPDNNDLTVDDYNEAHDIVPTSDFQLIRSLPVFNPNFGSSFAKTWNSDFNLDHRRNLDQETEAIVVTTPQLKQKGEAVGFEADLGVRMTPGSTDPTNGSYLTYVSKDFSSLTPILSCEDNPPLSESQAVGVVASSQANYMRVVVQSVPEDSSARVELLCIVRALLKKIKRRVTVGDKVLIGFVDWVDHRGMIENVFLMFLRSNSAVVFAYETCALDLIEATYESKVFPGEVVVVDSNGIQSLCLMSHPQPKQCIFGHIYFALPNSIVFGRSVYESRRQFGKVLNTESPIDCDVVIAVPDSSVVAELGNAEKAGVPFQQGFIRKFSMKEQASIVWQFLCSIQVNMIAIFLPWRSTSRSPDESHNLWKCLSNIVPKEKLLQKVIFTWMEGRSSVNIVENCVDHSQIQYSSCHLAHQTAKIKQFLRRKCGKEIDIWSVGVILYLLLTGVSPFWVETEKGICDTILKQFRGMNKLEKLALKDLFSILKFVLQIISDNLLFKHWDPGTISLFSY 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00672 717 MobiDBLite consensus disorder prediction 164 210 - -
Vivi3g00672 717 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 406 532 - -
Vivi3g00672 717 SUPERFAMILY Nucleic acid-binding proteins 336 403 IPR012340 -
Vivi3g00672 717 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 408 478 IPR029055 -
Vivi3g00672 717 Gene3D - 485 545 IPR029057 -
Vivi3g00672 717 Gene3D Transferase(Phosphotransferase) domain 1 582 701 - -
Vivi3g00672 717 MobiDBLite consensus disorder prediction 186 210 - -
Vivi3g00672 717 SUPERFAMILY Protein kinase-like (PK-like) 629 671 IPR011009 -
Vivi3g00672 717 Gene3D - 331 404 IPR012340 -
Vivi3g00672 717 SUPERFAMILY PRTase-like 461 533 IPR029057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00672 Vivi-Chr3 11132635 11135826 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00672 404 530 PRT Gene Family AT4G34740 74.803 1.09e-57 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00672 K00764 - vvo:131635378 900.197