Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00671 ATGTACTCAAATCCTCCTATGGATTACCCTTCTCATACACATTCATATCATCCATGGAGTATTCCTCCTACCTATCTCACAAACCCCTCTTTCACAAACCCCTCTTTCACAACTCCTACCACAACCTCATTTCCATCTTTCCCATGGGAAATCTTTACACCTTCTTACACTCATGGATCATCATCCCCAAATTTGTATCCACATCATGGATATTCACCACATCATTCATATATTTATCCATCTCATTCACATGTTTATCCAAATTACTATAACAATATTCATGAACCACACACGCACCACACAACAGAACAACTTTTGACCTCACACCCACTATTCACCCAACATCAAACAGTCAACGATTCCACTTATATGGGTAGCTACTACCAAGAAGCAACACATCAAATTCACTATCCAGAAATTTCTCTAGTGAAAAAGAAATCATGTCAGTTGTCTAAGTTGAGATTCTCCTCCTTATTATCGGTTAAAACCGACAAAAACAAAAGAGGAAAAAGAAGAACTATAACCAGAAAAGAAAAGCGAGCTTCTGAACCAAAAACTCTGAGATTTTCGACGACATTACCAACCATTTCATCAGAACCACAAATGCTCGATTCAAAAACCGAACCTCCCGACAACAACGACCTCACGGTGGATGACTACAACGAAGCTCACGATATCGTTCCTACCTCCGATTTTCAACTGATTCGTTCACTCCCTGTTTTTAACCCCAATTTCGGTTCTTCGTTCGCGAAAACTTGGAACTCCGATTTCAACCTTGACCACCGAAGAAATCTCGACCAGGAAACTGAAGCTATCGTCGTTACGACTCCTCAATTGAAGCAGAAAGGTGAAGCAGTTGGTTTTGAAGCTGATTTAGGTGTTAGGATGACTCCTGGATCCACTGATCCAACCAATGGTTCTTATTTGACATATGTATCTAAAGATTTCTCATCCCTCACTCCCATCCTCTCCTGCGAAGACAACCCTCCTCTCTCGGAATCCCAAGCCGTCGGCGTCGTCGCTTCCTCCCAAGCCAATTACATGCGCGTAGTCGTCCAGTCTGTCCCCGAAGATTCTTCCGCAAGGGTAGAACTTTTGTGCATTGTGAGGGCGCTGCTGAAGAAGATAAAGCGTAGGGTTACGGTTGGGGATAAGGTTCTAATAGGTTTTGTTGATTGGGTGGATCATAGGGGCATGATTGAGAACGTGTTTCTCATGTTTCTGAGAAGTAATAGTGCTGTTGTTTTTGCTTATGAGACTTGTGCTCTTGATTTGATTGAAGCTACTTATGAGAGTAAAGTATTCCCTGGTGAGGTTGTTGTGGTTGACAGTAACGGGATTCAATCGCTTTGTCTTATGTCTCATCCGCAGCCGAAGCAATGTATTTTCGGGCATATTTACTTTGCTTTGCCTAATTCTATTGTTTTTGGTAGGTCTGTGTATGAGTCGCGTAGACAATTCGGTAAGGTGCTTAATACTGAGAGCCCTATTGATTGTGATGTTGTGATAGCAGTTCCTGATTCTAGTGTTGTTGCTGAGCTTGGTAATGCTGAAAAAGCCGGTGTTCCTTTTCAACAAGGGTTTATTAGGAAGTTCTCAATGAAGGAACAAGCATCTATAGTTTGGCAGTTTCTTTGCAGTATTCAAGTGAATATGATTGCAATATTTCTTCCATGGCGTTCAACATCTAGATCACCTGATGAATCTCATAATTTATGGAAATGCTTAAGCAATATAGTGCCAAAGGAAAAGCTTCTTCAAAAGGTTATCTTCACCTGGATGGAAGGGCGGAGTAGTGTTAACATAGTTGAAAACTGTGTAGATCATTCTCAGATTCAATATAGTTCTTGTCATTTAGCCCATCAAACTGCAAAAATAAAACAATGTAAGTCCACTGTATTTGGAAAAAAATATTTTGCAGCTATTCTAGATGTTCCGAAAATAATGGGTTCGCATCCAATCGATGAAATACTGCTTTGGCATAATGCTATAAAAAATGAGTTAAATGAGATAACAGTGGAGACCAGAAAGATACAACACTCTGGAGATTATACTAATCTGTCGGTTTTTAATGAAAGGTTGAAATTCATTGCTGAAGTTTTCATATTTCACATTATTGCTAAAGGACATTATAGTGAAAAAGCTACTGCTATTATAGGTAGACAGATTGTTAATGTTGTTCATATTTGTCATTTTATGGGGATTATGCATAGGAATCTCAAGCCAAAGAAATTATTGTTGTCTAGTAAAGATGAAAGTGCTCTTCTTAAGGCAACTGATTTTGGTTTGTCTGTTTTTATTGAAGAAGTTCTTCGACGCAAATGCGGAAAGGAAATAGATATATGGAGTGTTGGAGTAATATTATATCTCTTACTTACTGGTGTTTCCCCATTTTGGGTTGAGACTGAAAAGGGAATATGTGATACAATATTGAAGCAATTCAGAGGTATGAATAAACTAGAGAAACTTGCATTGAAGGATTTATTTTCAATTCTGAAGTTTGTGTTGCAAATAATCAGTGACAATTTGTTATTCAAGCATTGGGATCCAGGAACAATATCTCTATTCTCATATTGA 2577 0.3877 MYSNPPMDYPSHTHSYHPWSIPPTYLTNPSFTNPSFTTPTTTSFPSFPWEIFTPSYTHGSSSPNLYPHHGYSPHHSYIYPSHSHVYPNYYNNIHEPHTHHTTEQLLTSHPLFTQHQTVNDSTYMGSYYQEATHQIHYPEISLVKKKSCQLSKLRFSSLLSVKTDKNKRGKRRTITRKEKRASEPKTLRFSTTLPTISSEPQMLDSKTEPPDNNDLTVDDYNEAHDIVPTSDFQLIRSLPVFNPNFGSSFAKTWNSDFNLDHRRNLDQETEAIVVTTPQLKQKGEAVGFEADLGVRMTPGSTDPTNGSYLTYVSKDFSSLTPILSCEDNPPLSESQAVGVVASSQANYMRVVVQSVPEDSSARVELLCIVRALLKKIKRRVTVGDKVLIGFVDWVDHRGMIENVFLMFLRSNSAVVFAYETCALDLIEATYESKVFPGEVVVVDSNGIQSLCLMSHPQPKQCIFGHIYFALPNSIVFGRSVYESRRQFGKVLNTESPIDCDVVIAVPDSSVVAELGNAEKAGVPFQQGFIRKFSMKEQASIVWQFLCSIQVNMIAIFLPWRSTSRSPDESHNLWKCLSNIVPKEKLLQKVIFTWMEGRSSVNIVENCVDHSQIQYSSCHLAHQTAKIKQCKSTVFGKKYFAAILDVPKIMGSHPIDEILLWHNAIKNELNEITVETRKIQHSGDYTNLSVFNERLKFIAEVFIFHIIAKGHYSEKATAIIGRQIVNVVHICHFMGIMHRNLKPKKLLLSSKDESALLKATDFGLSVFIEEVLRRKCGKEIDIWSVGVILYLLLTGVSPFWVETEKGICDTILKQFRGMNKLEKLALKDLFSILKFVLQIISDNLLFKHWDPGTISLFSY 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00671 858 Gene3D Transferase(Phosphotransferase) domain 1 704 813 - -
Vivi3g00671 858 SUPERFAMILY Protein kinase-like (PK-like) 702 813 IPR011009 -
Vivi3g00671 858 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 408 478 IPR029055 -
Vivi3g00671 858 MobiDBLite consensus disorder prediction 186 210 - -
Vivi3g00671 858 Gene3D - 485 546 IPR029057 -
Vivi3g00671 858 SUPERFAMILY PRTase-like 461 533 IPR029057 -
Vivi3g00671 858 MobiDBLite consensus disorder prediction 164 210 - -
Vivi3g00671 858 SMART serkin_6 603 844 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g00671 858 Pfam Protein kinase domain 703 821 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g00671 858 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 406 532 - -
Vivi3g00671 858 Gene3D - 331 404 IPR012340 -
Vivi3g00671 858 ProSiteProfiles Protein kinase domain profile. 589 858 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi3g00671 858 SUPERFAMILY Nucleic acid-binding proteins 336 403 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00671 Vivi-Chr3 11132635 11135830 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00671 404 530 PRT Gene Family AT4G34740 74.803 5.26e-57 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi3g00671 Pkinase 1.6e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00671 - - vvo:131635378 900.197