Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00642 ATGAGAGAAAATCCAATTTTATTAATGCTAATATTTTACTCTCTCTTACTTTTTCTTGGAGAATCAACATCTTCATCAACTCAATCAAAGAATGCTAATCAAGTTTATATTGTTTATATGGGAGCTGCAGATTCAACTAATGGAACCCTTCGCAAAGATCATGTCCATGTTTTAAACACTGTATTAAGAAAGAATGATAAAGCTCTAATACACAACTACAAACATGGATTCTCAGGCTTCGCTGCTCGATTGTCGAAAAACGAAGCAAACTCGATTGCTCAACAACCCGGAGTCGTGTCTGTGTTTCCGGATCCCATACTGAAGCTTCATACCACACGTTCTTGGGATTTTCTCAAGTCAGAAACTGAAATCATAATTAATAAGAGACTCTCTGGTTCTTCTCCATCTTCATCAGACATTGTAATTGGCATGTTAGACTCAGGTATATGGCCAGAAGCAGAAAGTTTTTCTGATAAGGGAATGGATCCTATCCCAGCCAAATGGAATGGCACATGCATGAAATCAAGTGACTTCAACTCATCAAATTGTAATAGGAAGATAATAGGAGCAAGGTATTATCCTAACCCTGATGATGATGATGCTGGGGCAAACACTCCAAGGGATACATTTGGTCATGGTACCCATACAGCGTCGACCGCGGCAGGGAATGTCGTGACAGGTGCATCTTACTACGGTCTTGCGACGGGGACATCAAAAGGCGGGTCTCCTGAATCAAGGTTGGCGATTTATAAAGTGTGCAGTGTTGGATGCTCGGGCTCTGGGATCCTTGCGGCGTTCGATGATGCAATTTCAGATGGAGTCGATGTGCTTTCGCTCTCCCTTGGCAGGTCTCCGGGGTTTCAACCTGACTTGACAACCGATGTGATTGCAATTGGGTCGTTCCATGCTGCGGAGCGTGGCATTTTGGTTGTTTGCTCGGCAGGGAACTCAGGACCTGGTCAAAATACAGTAGTTAATGATGCTCCTTGGATACTAACGGTTGCTGCCACCACCATTGATCGCGACTTTCAGTCCAATGTTCTCTTGGGTAATACCCAAGTCATTAAGGGTGAAGCTATAAATTTCTCTCCTCTTTCAAAATCATCTGATTATCCATTGATAACTGGAGAGTCTGCCAAGACAACAACTGCTGACTTAGATGAAGCAAGGAAGTGTCACCCAAGTTCATTAGATACAAATAAAGTGAAAGGAAAGATTGTTGTTTGTGATGGAATAAATGATGATTATTTAACCTTTGACAAAATTACGACCGTGCAAGAAGTTGGTGGAATAGGTCTTATTCATATTACTGACAGCGAAGGAGCAGTGGCAAATAACTATAAAGATTTTCCAGCAACAGTGGTAAGACCAGTAAATGCTTCTGCATTACTCCAGTATGTCAATTCAACAAGCAATCCAGTGGCAACAATTCTACCAACAATTACCGTCATGGATTATAAGCCCGCACCTATGGTGGCAATTTTTTCTAGTAGAGGACCTTCTGCACTTTCAAAGAATATTATCAAGCCTGATATTGCGGCACCAGGCGTTACCATTCTAGCCGCGTGGATTGGAAATGACGAAAAGTTTGTTCCAAAAGGGGAAAAACATTCTCTATATAATCTCGAATCAGGGACTTCCATGTCATGCCCACATGTTTCAGGCCTTGCAGGCAGCATAAAAGCTAGGAATCCAACTTGGAGTGCCTCCGCAATCAAATCAGCTATCATGACCTCTGCAACTCAAATTAACAATATGAAGGCTCCCATTACGACAGACACAGGACCGATTGCAACACCTTATGACTACGGAGCTGGCGAAATAACATCAACAGAACCATTTCAACCAGGGCTAGTTTATGAAACTAGTACCACTGACTACTTGAACTATCTATGTTACATTGGATTCAACACAACCACAATTAAGGTTATCTCAAGAACTGTCCCGAATAGTTTCAGTTGTCCCAAGGATTCTACTTCTGGTCATATTTCCAATATAAACTATCCTTCCATAGCAATCTCCAACTTCAATGGTAAAGAAATCGTGAATGTAAGTAGAACTGTTACGAATGTTGGCGAAGATGATGAAACTGTCTACTCCGCCATCGTCGATGCTCCTAGTGGGGTGAAAGTCCAATTGGTTCCAGAGAAACTACAATTTACAAAAAGTAGCAAACAAATAAGCTATCAAGTTATTTTCTCCTCAAGTCTAACTTCGTTGAAGAATGATCTGTTTGGATCTATTACATGGAGTAATGGTAAACATAATGTTAGAAGTCCTTTTGTATTAAGTATGTAG 2298 0.4112 MRENPILLMLIFYSLLLFLGESTSSSTQSKNANQVYIVYMGAADSTNGTLRKDHVHVLNTVLRKNDKALIHNYKHGFSGFAARLSKNEANSIAQQPGVVSVFPDPILKLHTTRSWDFLKSETEIIINKRLSGSSPSSSDIVIGMLDSGIWPEAESFSDKGMDPIPAKWNGTCMKSSDFNSSNCNRKIIGARYYPNPDDDDAGANTPRDTFGHGTHTASTAAGNVVTGASYYGLATGTSKGGSPESRLAIYKVCSVGCSGSGILAAFDDAISDGVDVLSLSLGRSPGFQPDLTTDVIAIGSFHAAERGILVVCSAGNSGPGQNTVVNDAPWILTVAATTIDRDFQSNVLLGNTQVIKGEAINFSPLSKSSDYPLITGESAKTTTADLDEARKCHPSSLDTNKVKGKIVVCDGINDDYLTFDKITTVQEVGGIGLIHITDSEGAVANNYKDFPATVVRPVNASALLQYVNSTSNPVATILPTITVMDYKPAPMVAIFSSRGPSALSKNIIKPDIAAPGVTILAAWIGNDEKFVPKGEKHSLYNLESGTSMSCPHVSGLAGSIKARNPTWSASAIKSAIMTSATQINNMKAPITTDTGPIATPYDYGAGEITSTEPFQPGLVYETSTTDYLNYLCYIGFNTTTIKVISRTVPNSFSCPKDSTSGHISNINYPSIAISNFNGKEIVNVSRTVTNVGEDDETVYSAIVDAPSGVKVQLVPEKLQFTKSSKQISYQVIFSSSLTSLKNDLFGSITWSNGKHNVRSPFVLSM 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00642 765 Gene3D - 340 484 - -
Vivi3g00642 765 ProSiteProfiles Serine proteases, subtilase domain profile. 114 615 - -
Vivi3g00642 765 Pfam Subtilase family 137 606 IPR000209 GO:0006508|GO:0008236
Vivi3g00642 765 ProSitePatterns Serine proteases, subtilase family, serine active site. 545 555 IPR023828 -
Vivi3g00642 765 Gene3D Peptidase S8/S53 domain 139 627 IPR036852 GO:0004252|GO:0006508
Vivi3g00642 765 CDD PA_subtilisin_like 346 477 - -
Vivi3g00642 765 FunFam subtilisin-like protease SBT1.5 340 484 - -
Vivi3g00642 765 Pfam Peptidase inhibitor I9 35 110 IPR010259 -
Vivi3g00642 765 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 110 IPR037045 -
Vivi3g00642 765 Pfam Fibronectin type-III domain 665 762 IPR041469 -
Vivi3g00642 765 CDD Peptidases_S8_3 107 581 IPR034197 -
Vivi3g00642 765 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 36 762 IPR045051 -
Vivi3g00642 765 FunFam Subtilisin-like protease SBT5.3 24 110 - -
Vivi3g00642 765 Gene3D - 631 765 - -
Vivi3g00642 765 FunFam Subtilisin-like protease SBT1.5 139 350 - -
Vivi3g00642 765 SUPERFAMILY Subtilisin-like 109 610 IPR036852 GO:0004252|GO:0006508
Vivi3g00642 765 PRINTS Subtilisin serine protease family (S8) signature 208 221 IPR015500 -
Vivi3g00642 765 PRINTS Subtilisin serine protease family (S8) signature 137 156 IPR015500 -
Vivi3g00642 765 PRINTS Subtilisin serine protease family (S8) signature 544 560 IPR015500 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00642 Vivi-Chr3 10844164 10847896 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00642 36 764 Subtilisin-like Serine Gene Family AT1G20150 53.351 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00642 K25898 - gmx:100820194 1117.45