Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00640 ATGAGAGGAAATCCAATTTTGTTGATATTAATATTTTACTCTCTCTTCATTTATCTTGGAGAATCAAGTGAATCAGAGAATGATGATCAAGTTTATATTGTTTATATGGGAGCTGCAGCTTCAACTAATGGAACCCTTCGCAAAGATCATGCCCATCTTTTGAACACTCTATTAGCAAGGAATGGGAATGCTTTAGTACACAACTACATACATGGATTCTCAGGCTTCGCAGCTCGTATGTCAAAAAATGAAGCAAACTGGATTGCTGAACAACCTGGAGTCGTGTCTGTGTTTCCGGATCAAACTATGAAGCTTCACACAACACGCTCTTGGGATTTTCTCAAATCACTAACTCCCATTCAAATTGACAACAGGCCATCCGATTCTTCCCACTCGTCAGACATCGTAATTGGCGTGTTAGACACAGGTATATGGCCAGAATCAGCAAGTTTTTCAGACGAGGGAATGAGTCCTATTCCATCTGGTTGGAAAGGAATTTGTATGACATCAACTGATTTCAACTCATCCAGCTGTAACAGGAAGATAATAGGAGCAAGGTATTATCCTGACATTGGTGGTGTGGAGAACACTGTCAGAGATATATATGGACATGGGACTCACACTGCTTCGACAGCAGCAGGGAAGGTCGTGAGTGGTGTATCATACTATGGTTTTGCGAAAGGGACGGCAAGAGGTGGATCTCCTGAATCGAGGTTGGCGATTTATAAAGTATGTTATGGAACTCATCCTGAATGCTATAACTCTGCCATACTTGCGGCTTTTGACGATGCTATTAATGATGGAGTTCATGTACTTTCTCTTTCACTCGGTCCGGGTTCGAAATCCCGGCCTGCCTTGACAAACGACGTGATTGCAATCGGAGCGTTCCATGCAGTGGAGCGCGGCATTATGGTGGTTTGCTCTGCTGGAAATGATGGAAATGTTGGACCGGGAGACACTACCGTTGTGAACGACGTGCCTTGGATATTTACTGTTGGAGCCACCACCATTGATCGTGATTTTCTGTCCAATGTTGCCATGGGTAATAAAAAAGTTATTAAGGGTCGAGCTATAAATCTCTCTCCGCTTTCAAAATCCGCAAAATATCCATTGATAACAGGAGAAGCTGCAAAGGCAACTACCGCGGACTTAGCAGAAGCAAGGCAGTGTCATTTTAATTCATTAGATAAAGATAAAGTCAAGGGAAAGATTGTCCTCTGCGATGGTACAACTGATCATCTTTCAACCGGTTACAAATTTCTTGCAGTAAAAGAGGTGGGGGGATTAGGTCTTGTTCATATTACTGACATAGATATAGCAGAGGCAAATATCTATGAACTTTTACCAGCAACAACAGTGGTAACACCAAAAGATGCATCCTCAATTCTAGAATATTTGAATTCAACAAGCAATCCAGTGGCAACAATTCTACCAACAATTTCAGTGATAGATTACAAGCCTGCACCTATGGTGGCAAGCTTTTCAAGTAGAGGGCCTTCAACGCTTTCTAAGAATATTCTCAAGCCTGATATTGCAGCACCAGGTGTTAACATTCTTGCTGCATGGACTGGAAATGACGCAAAAGGGAGAGAACCTCCGCTATATAACCTTGAATCAGGGACTTCCATGTCATGTCCACATGTTTCAGGCCTTGCAGGAAGCATTAAATCTAAAAATCCCACTTGGAGTGCCTCTGCAATCAGATCAGCCATCATGACCTCTGCAACTCAATTTAACAATATGAAGACTCCCATTACAACAGATTTAGGGTCGGTTTCCACACCTTATGACTATGGAGCTGGAGAAATTACACTGAATAGATCATTCCGTCCAGGGCTAGTTTACGAAACCAGCACAATTGACTACTTAAACTATTTGTGTTACATGGGATACAATACAACCACAATTAAAGTTATCGCAAGAACCATCCCTGATAGTTTTAGTTGCCCTAAGGATTCGAATCCTGATCATATTTCCAATATCAACTATCCTTCCATAGCAATCTCCAACTTCATTGAAAGACAAATCGTGAATGTGAGTAGAACTGTTACGAATGTTGGTGAAAAAAATGAAATAGTCTACTCCGCCATCATTGATGCTCCTAGCAGCGTGAAAGTCCAATTGATTCCAGAAAAACTCAATTTTACCAAAAATAGCAAAAAACTGAGCTACCAAATTATTTTCTCCTACACTTTAATTCCATTGAAGGATGATCTGTTTGGATCCATTACCTGGAAAAGTGGTGATTATGAAGTTCGAAGTCCTTTTGTATTGGCCGTCTAG 2283 0.4122 MRGNPILLILIFYSLFIYLGESSESENDDQVYIVYMGAAASTNGTLRKDHAHLLNTLLARNGNALVHNYIHGFSGFAARMSKNEANWIAEQPGVVSVFPDQTMKLHTTRSWDFLKSLTPIQIDNRPSDSSHSSDIVIGVLDTGIWPESASFSDEGMSPIPSGWKGICMTSTDFNSSSCNRKIIGARYYPDIGGVENTVRDIYGHGTHTASTAAGKVVSGVSYYGFAKGTARGGSPESRLAIYKVCYGTHPECYNSAILAAFDDAINDGVHVLSLSLGPGSKSRPALTNDVIAIGAFHAVERGIMVVCSAGNDGNVGPGDTTVVNDVPWIFTVGATTIDRDFLSNVAMGNKKVIKGRAINLSPLSKSAKYPLITGEAAKATTADLAEARQCHFNSLDKDKVKGKIVLCDGTTDHLSTGYKFLAVKEVGGLGLVHITDIDIAEANIYELLPATTVVTPKDASSILEYLNSTSNPVATILPTISVIDYKPAPMVASFSSRGPSTLSKNILKPDIAAPGVNILAAWTGNDAKGREPPLYNLESGTSMSCPHVSGLAGSIKSKNPTWSASAIRSAIMTSATQFNNMKTPITTDLGSVSTPYDYGAGEITLNRSFRPGLVYETSTIDYLNYLCYMGYNTTTIKVIARTIPDSFSCPKDSNPDHISNINYPSIAISNFIERQIVNVSRTVTNVGEKNEIVYSAIIDAPSSVKVQLIPEKLNFTKNSKKLSYQIIFSYTLIPLKDDLFGSITWKSGDYEVRSPFVLAV 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00640 760 Pfam Peptidase inhibitor I9 31 106 IPR010259 -
Vivi3g00640 760 ProSitePatterns Serine proteases, subtilase family, serine active site. 540 550 IPR023828 -
Vivi3g00640 760 Pfam Subtilase family 132 601 IPR000209 GO:0006508|GO:0008236
Vivi3g00640 760 Pfam Fibronectin type-III domain 660 757 IPR041469 -
Vivi3g00640 760 Gene3D - 626 760 - -
Vivi3g00640 760 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 32 757 IPR045051 -
Vivi3g00640 760 PRINTS Subtilisin serine protease family (S8) signature 539 555 IPR015500 -
Vivi3g00640 760 PRINTS Subtilisin serine protease family (S8) signature 132 151 IPR015500 -
Vivi3g00640 760 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Vivi3g00640 760 CDD PA_subtilisin_like 348 476 - -
Vivi3g00640 760 SUPERFAMILY Subtilisin-like 105 610 IPR036852 GO:0004252|GO:0006508
Vivi3g00640 760 Gene3D Peptidase S8/S53 domain 134 622 IPR036852 GO:0004252|GO:0006508
Vivi3g00640 760 CDD Peptidases_S8_3 104 576 IPR034197 -
Vivi3g00640 760 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 19 106 IPR037045 -
Vivi3g00640 760 FunFam Subtilisin-like protease SBT1.5 134 351 - -
Vivi3g00640 760 Gene3D - 338 483 - -
Vivi3g00640 760 ProSiteProfiles Serine proteases, subtilase domain profile. 110 609 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00640 Vivi-Chr3 10806537 10809701 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00640 32 758 Subtilisin-like Serine Gene Family AT1G20150 50.133 0.0 721
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00640 K25898 - gmx:100820194 991.49