Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00638 ATGGCTGTGCTAATGATAAAGCTTCCAATTACTAATTCATCACCTAGATTAATACTATTACGTTTCATTCTTTTCTTAGTTTTATCATATAGAACAAACTCATTGTTGAAACTACCACCAAATGTTACCGTTCCAGCACTCATAGCTTTTGGAGATTCAATCCTGGATACTGGAAATAACAACAACATCACAACTATTGTCAAGTGCAATTTCCCTCCTTATGGTCAAGATTTTCAAGGAGGCATTCCAACCGGTCGATTTTGCAATGGCAAAAATCCCTCAGACTTGATAGTTGAAGAATTAGGTATTAAGGAGTTTTTACCAGCTTATTTAGATCCAAATCTGAAGCCAAGTGACCTTCCTACTGGTGTATGCTTTGCTTCTGGTGCTGCTGGTTATGATCCTTTAACATCTGAATTAGTGTCGGTGATTTCAATGTCTAAACAACTAGAAATGTTCAAAGCATACATAGAGAGGCTTAAAGGTGTGGTTGGAGAGAAAAGAAAAAACTTCATCATAGCCAACACTCTTTACATTGTTGTAGCTGGAAGTGATGACCTTGCCAACACTTATTTTACTTTTCGCACCCGGAAACTTCAATATGATGTTCCAGCTTATACTGATCTTATGGTCAAAGAAGCCTCCAAGTTCGTTAAGGGATTATATCAACTTGGAGCTAGAAGAATTGGAGTGTTTAGTGTAGCACCTATTGGATCCATACCAGCACAGAGGACACTAGGTGGAGGTGTATTTAGAAATTTCAATGAGGAATACAATGAAGCAGCCAAGTTATTTAACTCAAAACTCTCCAAGGAATTGGATTATCTTCATTCTAATTTGCATAATAGTAGGGTTATTTATATTGACATATACACTCCCATACTTGATATCATTCAATATCCCAAAAAATATGGGTATAAAATTGCAAATAAAGGTTGTTGTGGAACAGGAAAACTAGAGGTATCAATTTTATGTAACCCTTTGACTCCTACTTGTGCTGATAATTCAGAATATGTGTTTTGGGATAGCTATCATCCTACAGAAAATGTATACAGAAAGCTTCTGGATGAAGTTCTTCCGAAATATGTGGATCGCTTGATATGA 1104 0.3623 MAVLMIKLPITNSSPRLILLRFILFLVLSYRTNSLLKLPPNVTVPALIAFGDSILDTGNNNNITTIVKCNFPPYGQDFQGGIPTGRFCNGKNPSDLIVEELGIKEFLPAYLDPNLKPSDLPTGVCFASGAAGYDPLTSELVSVISMSKQLEMFKAYIERLKGVVGEKRKNFIIANTLYIVVAGSDDLANTYFTFRTRKLQYDVPAYTDLMVKEASKFVKGLYQLGARRIGVFSVAPIGSIPAQRTLGGGVFRNFNEEYNEAAKLFNSKLSKELDYLHSNLHNSRVIYIDIYTPILDIIQYPKKYGYKIANKGCCGTGKLEVSILCNPLTPTCADNSEYVFWDSYHPTENVYRKLLDEVLPKYVDRLI 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00638 367 Pfam GDSL-like Lipase/Acylhydrolase 48 356 IPR001087 GO:0016788
Vivi3g00638 367 SUPERFAMILY SGNH hydrolase 169 362 - -
Vivi3g00638 367 CDD SGNH_plant_lipase_like 45 362 IPR035669 -
Vivi3g00638 367 FunFam GDSL esterase/lipase APG 36 363 - -
Vivi3g00638 367 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 47 58 IPR008265 GO:0006629|GO:0016298
Vivi3g00638 367 Gene3D SGNH hydrolase 38 362 IPR036514 -
Vivi3g00638 367 PANTHER GDSL ESTERASE/LIPASE EXL3 24 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00638 Vivi-Chr3 10779549 10781191 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00638 41 359 Pollen Coat Proteome AT1G75910 38.199 2.87e-71 224
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00638 - - gmx:100793078 518.464