Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00637 ATGGCTGTGTATATGTTGAAGGTTCCAAGCACTTATTCTTCAACTAAATTAATACTATTACGTTTCATTTTTTTGTTAGTTTTATCAAATAGAACAAATTCATTGGTGAAACTAGCACCAAATGTTACAGTTCCTGCATTCATAGCTTTTGGAGATTCCATAATGGATACTGGAAATAACAACCATATCAAAACTATTGTCAAGTGCAATTTCCCTCCTTATGGTCAAGATTTTCAAGGAGGGGTTCCAACTGGTCGGTTTTGCAATGGCAAAAATCCTTCAGATTTGATAGTTGAATATTTTGGTATTAAGGAGCTATTACCAGCTTATTTGGATCCAAATCTGAAGCCAAGTGACCTTCCTACTGGTGTATCCTTTGCTTCTGGTGCTTCTGGTTATGATCCTTTAACTTCCAAAATTGTGTCGGTGCTTTCAATGTCTGATCAACTAGAAATGTTCAAAGAATACATAGTGAAACTCAAAGGTGTGGTTGGAGAAAAAAGAAAAAACTTTATCCTAGCCAACACACTTTTTGTTGTTGTAGCTGGAAGTGATGACCTTGCCAACACTTATTTTACTATTCGCACCCCACAACTACACTATGATGTTCCTGCCTATACTGACCTTATGGTCAATGAAGCCTCAAAGTTCGTTAAGGAAATTTATCAACTTGGAGCTAGAAGAATTGGAGTGTTCAGTGCAGCACCAATTGGATACTTACCATCACAAAGGACTCTAGGTGGAGGTTTATATAGAAATATCAATGAGAAATACAATGAAGCAGCCAAGTTATTTAACTCCAAACTCTCAAATCAAATGGACTATCTTCATTCTAATTTGCCTAATAGTAGGGTTGTTTATACTGATATTTACACCCCCTTACTTGATATCATTCTAAAGCCTCAAAAATATGGGTATAAAGTTGCAGATAAAGGTTGCTGTGGAACAGGAAAGCTAGAAGTTTCAGTGTTATGTAACCCTTTGGTTCCAGCTTGTGATAATAATAAAGAATATGTATTTTGGGATAGTTATCATCCTACAGAGAGTGTATACAGAACACTTGTGGCTGAAGTTCTTCCAAAATATGTTGATCGTTTGACAAGATGA 1107 0.3595 MAVYMLKVPSTYSSTKLILLRFIFLLVLSNRTNSLVKLAPNVTVPAFIAFGDSIMDTGNNNHIKTIVKCNFPPYGQDFQGGVPTGRFCNGKNPSDLIVEYFGIKELLPAYLDPNLKPSDLPTGVSFASGASGYDPLTSKIVSVLSMSDQLEMFKEYIVKLKGVVGEKRKNFILANTLFVVVAGSDDLANTYFTIRTPQLHYDVPAYTDLMVNEASKFVKEIYQLGARRIGVFSAAPIGYLPSQRTLGGGLYRNINEKYNEAAKLFNSKLSNQMDYLHSNLPNSRVVYTDIYTPLLDIILKPQKYGYKVADKGCCGTGKLEVSVLCNPLVPACDNNKEYVFWDSYHPTESVYRTLVAEVLPKYVDRLTR 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00637 368 FunFam GDSL esterase/lipase APG 36 363 - -
Vivi3g00637 368 Pfam GDSL-like Lipase/Acylhydrolase 48 354 IPR001087 GO:0016788
Vivi3g00637 368 CDD SGNH_plant_lipase_like 45 362 IPR035669 -
Vivi3g00637 368 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 47 58 IPR008265 GO:0006629|GO:0016298
Vivi3g00637 368 Gene3D SGNH hydrolase 34 362 IPR036514 -
Vivi3g00637 368 PANTHER GDSL ESTERASE/LIPASE EXL3 26 357 - -
Vivi3g00637 368 SUPERFAMILY SGNH hydrolase 47 362 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00637 Vivi-Chr3 10713443 10716688 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00637 39 359 Pollen Coat Proteome AT1G75910 38.889 1.60e-72 228
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00637 - - gmx:100793078 521.546