Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00636 ATGAGAGGTCTCAACGGAGCGATATCCATCGCCAGAGCGTTAAAAGCCAACTCCACCGCCGCAACCACTCTTCTCCGACCACCGCGAGCAGCTCCATATGTCACATCATGCTGGACTTCTTCCAACCTTCGGAATCTCGTTGATCGCCCCGACCTATCAACTACCCTAGTTCCTCGAAGCAACACCGTAGAGTTCAGGTATTACAGTTCTTCTACTGCCACGTCTCTCGCGCAGCAAGATCTCAAGGCGAAAAGCTCAGAACAGAATCGCTTCAATCCCAAAGAAGTTGTTCTCTTTCAGTATGAAGCTTGTCCCTTCTGCAACAAGGTTAAAGCTTTTCTAGATTATTATGATATTAAGTACAAAGTGGTGGAGGTTAATCCGATGAACAAGAAAGAGATCAAATGGTCTGATTACAAAAAGGTGCCTATTGTCACTGTTGATGGAGAACAATTGGTTGATTCTTCAGATATAATTGATAAATTGGTCAAAAGGATACATCCAGATTATGACCTAAACGCAGATGAAGAGAAGAAGTGGCGCGGGTGGGTGGATAATCACTTGGTGCATGTTTTGTCGCCAAACATATATCGAACTGTTTCTGAAGCTCTTGAATCATTTGATTATATCACCACTAAAGGCAATTTCAGTTTATATGAGAGGTTAGTGGCAAAGTATGGTGGGGCTGCTGCCATGTATTTCGTGTCGAAGAAATTGAAGAAGAGACACAATATCACTGATGAGCGTGAAGCATTGTATGGAGCTGCTGAACAATGGGTTGATGCTTTGAAGGGCCGAAAATTTCTTGGTGATTTGGAACCTAATTTAGCAGATCTTGCTGTCTTTGGTGTTCTAAGACCTATCCGCCACCTCAAGTCAGGTCGAGATATGGTAGAGCATACAAGGATTGGAAAATGGTTTTCTGAGATGGAACATGCAGTAGGACAGGCTTCCTGA 957 0.4357 MRGLNGAISIARALKANSTAATTLLRPPRAAPYVTSCWTSSNLRNLVDRPDLSTTLVPRSNTVEFRYYSSSTATSLAQQDLKAKSSEQNRFNPKEVVLFQYEACPFCNKVKAFLDYYDIKYKVVEVNPMNKKEIKWSDYKKVPIVTVDGEQLVDSSDIIDKLVKRIHPDYDLNADEEKKWRGWVDNHLVHVLSPNIYRTVSEALESFDYITTKGNFSLYERLVAKYGGAAAMYFVSKKLKKRHNITDEREALYGAAEQWVDALKGRKFLGDLEPNLADLAVFGVLRPIRHLKSGRDMVEHTRIGKWFSEMEHAVGQAS 318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00636 318 Gene3D Glutaredoxin 82 167 - -
Vivi3g00636 318 SUPERFAMILY Thioredoxin-like 95 186 IPR036249 -
Vivi3g00636 318 CDD GST_C_mPGES2 170 315 IPR034335 -
Vivi3g00636 318 PANTHER MICROSOMAL PROSTAGLANDIN E SYNTHASE-2 19 317 - -
Vivi3g00636 318 SFLD Prostaglandin E synthase like.1 67 317 IPR034334 GO:0050220
Vivi3g00636 318 ProSitePatterns Glutaredoxin active site. 98 114 IPR011767 -
Vivi3g00636 318 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 94 171 IPR004045 -
Vivi3g00636 318 ProSiteProfiles Glutaredoxin domain profile. 84 183 - -
Vivi3g00636 318 SUPERFAMILY GST C-terminal domain-like 174 314 IPR036282 -
Vivi3g00636 318 SFLD Glutathione Transferase (cytosolic) 67 317 IPR040079 -
Vivi3g00636 318 Gene3D - 172 318 - -
Vivi3g00636 318 Pfam Glutathione S-transferase, N-terminal domain 98 164 IPR004045 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00636 Vivi-Chr3 10631696 10634573 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00636 66 182 Glutathione S-transferase Gene Family AT5G16710 29.412 2.90e-06 46.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00636 K05309 - gmx:100804696 451.055