Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00606 ATGTGTACCTTGCTGATATGTTTCATATTGTTGGGAGGAGTTGTTTCTTACACAACTCATGCTATAAAACTTCCACCAAATGTTTCATTACCAGCAGTGTTTGCTTTTGGAGATTCAATCATGGATACAGGTAACAACAATAATAACATGAAAACACTTGCCAAGTGCAATTTTCCTCCATATGGGAAAGATTTCAAAGGAGGTGTCCCAACTGGTCGGTTCGGCAATGGAAAAGTTCCATCCGACTTTTTAGTTGAAGTATTAGGTATTAAGGAACTTCTTCCTGCATATTTGGATCCAAATATTCAACCTAACGACCTCATCACGGGTGTTTGCTTTGCGTCGGGTGGTGCCGGATACGATCCTCTCACATCGCAAATAGCGTCAGTTATATCATTGTCCGATCAAATAGAATTGTTCAAAGAATACATAGGAAAGCTAAAAGGACTTGTTGGAGAGGAAAGAGCAAACTTCATCATAGAAAATAGTATCTACCTTGTTGTTCAAGGAAGCAATGACATCTCCAATACATATTTTTTGAGTCATGTTAGAGAATTACAATACGATGTTCCCGCTTACACTGATCTCATGCTCAACGCCGCTACAAATTTCTTAACGGAAATATATAAACTTGGTGCAAGAAAGATAGGAGTATTTAGTGCTCCACCAATTGGATGTGTGCCTTTTCAAAGAACAGTTGCTGGAGGAATTGAGAGAGAATGTTCAGAAAAAATCAATGATTTGTGCAAGTTATTTAACACTAAATTATCAAAGGAGTTGACTTCTCTTAACCATAGGTTGACTAATTCAAGGATGGTTTATCTTGATGTTTATGCACCTCTTCTTGACATCATTGTAAATTATCAAAATTATGGTTATAAAGTTGGAGACAAAGGATGTTGTGGAACAGGTGAAGTAGAGGCATCAGTGTTGTGTAATCAATTCTCTACTACGTGTGAAAATGCCAATGACTATGTTTTTTGGGACAGTTTTCATCCCACAGAGAGTGTCTATATAAAGCTTGTAGATTCTCTTATTCAAAAATATATGCACCAATTTCTCTAG 1065 0.369 MCTLLICFILLGGVVSYTTHAIKLPPNVSLPAVFAFGDSIMDTGNNNNNMKTLAKCNFPPYGKDFKGGVPTGRFGNGKVPSDFLVEVLGIKELLPAYLDPNIQPNDLITGVCFASGGAGYDPLTSQIASVISLSDQIELFKEYIGKLKGLVGEERANFIIENSIYLVVQGSNDISNTYFLSHVRELQYDVPAYTDLMLNAATNFLTEIYKLGARKIGVFSAPPIGCVPFQRTVAGGIERECSEKINDLCKLFNTKLSKELTSLNHRLTNSRMVYLDVYAPLLDIIVNYQNYGYKVGDKGCCGTGEVEASVLCNQFSTTCENANDYVFWDSFHPTESVYIKLVDSLIQKYMHQFL 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00606 354 FunFam GDSL esterase/lipase APG 22 350 - -
Vivi3g00606 354 PANTHER GDSL ESTERASE/LIPASE EXL3 11 344 - -
Vivi3g00606 354 CDD SGNH_plant_lipase_like 31 349 IPR035669 -
Vivi3g00606 354 Pfam GDSL-like Lipase/Acylhydrolase 33 343 IPR001087 GO:0016788
Vivi3g00606 354 SUPERFAMILY SGNH hydrolase 32 349 - -
Vivi3g00606 354 Gene3D SGNH hydrolase 23 351 IPR036514 -
Vivi3g00606 354 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 33 44 IPR008265 GO:0006629|GO:0016298
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00606 Vivi-Chr3 10144765 10146656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00606 1 347 Pollen Coat Proteome AT1G75910 40.000 2.52e-78 242
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00606 - - gmx:100793604 544.658