Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00594 ATGGCTTTTTTTAAGCTTTTACTTTCATCTCTTTTTGTATCTTTTCTCATTCTCCATCTTGTTCATGCTCAACAGGAACCACTGGTACACTCCCAAACTCAGGTTTCGCTTCAGCAGCAGATAGACTGCAATGGAGCATGTGCTGCGAGATGCCGTTTAGCATCTCGGCAGCGCCTCTGCCACCGGGCATGTGGAACTTGTTGCAGGCGCTGCAACTGCGTGCCACCGGGAACTTCCGGTGGCCAAGAAGTGTGTCCATGCTATGCCAAACAAACCACCCACGGAGGCAGACGCAAGTGCCCTTGA 306 0.5131 MAFFKLLLSSLFVSFLILHLVHAQQEPLVHSQTQVSLQQQIDCNGACAARCRLASRQRLCHRACGTCCRRCNCVPPGTSGGQEVCPCYAKQTTHGGRRKCP 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00594 101 PANTHER EXTENSIN, PROLINE-RICH PROTEIN 5 101 - -
Vivi3g00594 101 Pfam Gibberellin regulated protein 42 101 IPR003854 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00594 Vivi-Chr3 9870458 9871239 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00594 - - gmx:100790448 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00594 3 9870458 9871239 Vivi3g00594 3 9870458 9871239 ECH
Vivi4g05916 4 196096881 196097907 Vivi3g00594 3 9870458 9871239 PCT
Vivi3g00594 3 9870458 9871239 Vivi3g00594 3 9870458 9871239 PCT