Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00588 ATGATAGGATCCTTTATTACCAGGATACTTGTAATGATTTTTGGCTATGCCTACCCAGCTTATGAATGCTATAAAGCAGTTGAAATGAATAGGCCTGAAATTGAACAGCTACGCTTTTGGTGCCAGTATTGGATTTTGGTTGCTCTTTTGACAGTGTGTGAGCGGATTGGCGATACGTTTATATCATGGGTTCCGATGTATAGTGAAGCTAAGTTGGCATTTTTTATATATCTTTGGTACCCGAAAACTAAGGGAACAACATATGTGTATGATTCTTTCTTTAGACCATATGTTGCGAAACACGAGACAGATATCGATCGCAACTTGATGGAACTAAGAACACGGGCAGGAGATATTGCAGTTACTTATTGGCAAAAGGCTGCTAGTTATGGCCAGACTAGAGTTTTTGACATTTTGCAGTATGTTGCTGCTCAATCAGCGCCACCGGCTCCCCCTGCGCAGCAGCGGCGACAGGGTGTGAGGGGCCGCCAACCAGCAGCCAGCAATGCTCCTGCGACAGCACCACCTGCTGAGGGTCCAACTCCTGCCACTTCTAGCTCATCTTCAAGTCAGCACCAGAAGGAAGTAGCAGAGGAGTTAAGTTCTTCACAAGCACCTAAAGCACCCTCCTCTTTAAATGGTTTAAATACTCAGAAGAATAATTCTGCATCCGAATCTGGCAACCAATCTGCACCTGTAGAGGCAGAGCCAATGCAGATTGAAACAGCACTGCCTTCATCCTCTTCTCCAAATGAAAACCCTCCTTCGAATGAAACAGTAATGGAGGAGAGCATTAGGGTCACACGAGGCAGACTAAGAAAAAATAGATCATTAGGAACTCAGTAG 846 0.448 MIGSFITRILVMIFGYAYPAYECYKAVEMNRPEIEQLRFWCQYWILVALLTVCERIGDTFISWVPMYSEAKLAFFIYLWYPKTKGTTYVYDSFFRPYVAKHETDIDRNLMELRTRAGDIAVTYWQKAASYGQTRVFDILQYVAAQSAPPAPPAQQRRQGVRGRQPAASNAPATAPPAEGPTPATSSSSSSQHQKEVAEELSSSQAPKAPSSLNGLNTQKNNSASESGNQSAPVEAEPMQIETALPSSSSPNENPPSNETVMEESIRVTRGRLRKNRSLGTQ 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00588 281 MobiDBLite consensus disorder prediction 147 281 - -
Vivi3g00588 281 MobiDBLite consensus disorder prediction 179 263 - -
Vivi3g00588 281 PANTHER HVA22-LIKE PROTEINS 12 142 IPR004345 -
Vivi3g00588 281 Pfam TB2/DP1, HVA22 family 19 97 IPR004345 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00588 Vivi-Chr3 9811839 9814623 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00588 - K17338 gmx:100815932 376.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00588 3 9811839 9814623 Vivi3g00588 3 9811839 9814623 ECH
Vivi4g05903 4 195916918 195920046 Vivi3g00588 3 9811839 9814623 PCT