Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00583 ATGGAAATTGAACAGCCACTACCCACCATCCTCATCAAGTCTAGATTCAAACGCATATGTGTTTACTGTGGTAGCACTCCTGGAAGAAATCCTAGCTACCAAATTGCTGCTATTCAGCTCGGAAAACAATTGGTGGAAAGGAAGATTGACTTGGTATATGGAGGAGGCAGTATTGGGCTGATGGGTCGTATCTCACAAGTTGTTTATGATGGCGGATGTCACGTGTTAGGAGTCATTCCAAAAACACTTATGCCAAAAGAGATAACTGGTGAGAGTGTTGGAGAAGTAAGAGCAGTATCAGGGATGCACCAACGCAAAGCTGAAATGGCTAAACAAGCTGATGCTTTTATTGCCATGCCAGGTGGATATGGCACATTGGAAGAACTACTTGAAATTATTACCTGGGCTCAACTTGGGATCCATGATAAACCTGTGGGGTTATTGAACGTGGATGGTTACTACAACTCATTGTTGGCATTCATGGACAAAGCTGTAGATGAAGGTTTTGTAACACCAGCTGCCCGTCACATTATTGTATCTGCCCAAACTGCCCAAGACCTCATGTGCAAACTTGAGGAATATGTTCCTGAGCATTGTGGTGTGGCTCCTAAGCTAAGTTGGGAGATGGAACAACAGTTGGTTAACACAGCAAAGTCAGATATTTCTCGTTGA 672 0.436 MEIEQPLPTILIKSRFKRICVYCGSTPGRNPSYQIAAIQLGKQLVERKIDLVYGGGSIGLMGRISQVVYDGGCHVLGVIPKTLMPKEITGESVGEVRAVSGMHQRKAEMAKQADAFIAMPGGYGTLEELLEIITWAQLGIHDKPVGLLNVDGYYNSLLAFMDKAVDEGFVTPAARHIIVSAQTAQDLMCKLEEYVPEHCGVAPKLSWEMEQQLVNTAKSDISR 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00583 223 NCBIfam Rossman fold protein, TIGR00730 family 17 194 IPR005269 GO:0009691|GO:0016787
Vivi3g00583 223 PANTHER LOG FAMILY PROTEIN YJL055W 13 213 - -
Vivi3g00583 223 Gene3D - 10 193 - -
Vivi3g00583 223 Pfam Possible lysine decarboxylase 61 190 IPR031100 -
Vivi3g00583 223 FunFam CASP-like protein 9 193 - -
Vivi3g00583 223 SUPERFAMILY MCP/YpsA-like 15 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00583 Vivi-Chr3 9748293 9751255 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00583 K22522 - gmx:100782787 406.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00583 3 9748293 9751255 Vivi3g00583 3 9748293 9751255 ECH
Vivi4g05897 4 195883003 195884942 Vivi3g00583 3 9748293 9751255 PCT