Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00582 ATGGCTCTAACAAAATCAACTAAACTTCCTCAAACTCAACTCATCAAACAAATCCTTAAAAGATGTTCAAGCCTAACCAAAAAACAACAACAACAACAATCCTACGATGATCATCGTTTAAATGTTCCTAAAGGCCACTTTGTTGTCTATGTTGGTGAAAACCGAAGCAGGTACATTGTCCCTATTTCCTTCCTAACTAGACCAGAGTTTCAGAATCTTTTACATCAAGCTGAAGAAGAGTTCGGATTCGATCATGACATGGGTCTCACCATCCCTTGCGACCAAGATGCTTTTGAGTCTCTCACTTCCATGCTTAGATAG 321 0.3925 MALTKSTKLPQTQLIKQILKRCSSLTKKQQQQQSYDDHRLNVPKGHFVVYVGENRSRYIVPISFLTRPEFQNLLHQAEEEFGFDHDMGLTIPCDQDAFESLTSMLR 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00582 106 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 104 IPR003676 GO:0009733
Vivi3g00582 106 Pfam Auxin responsive protein 20 105 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00582 Vivi-Chr3 9599244 9599902 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00582 3 105 Calmodulin-binding Proteins AT4G34750 39.806 1.08e-20 79.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00582 K14488 - tcc:18591528 164.466
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi3g00582 3 9599244 9599902 Vivi3g00582 3 9599244 9599902 ECH