Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi3g00535 ATGGAAAATGAACATTATTCTTCTTCCACAATGGATATGCTACGTTCTGAGCCTATGCAACTTGCTCAATTGATCATTCCAATTGAATCAGCTCATCGAACCATCTCGTACCTTGGCGATCTTGGTCTTTTTCAATTCAAAGATCTTAATGAAGATAAAAGCCCGTTCCAACGAACTTATGCTTCTCAGGTTAAAAGATGCGGAGAAATGACGCGTACAATGCGATTATTTAAGGAACAAATGACAAAGGCCAGTATATCTCCCTCAACTCTATCAACACCAGCTGATGTGGATCTAGAAAAATTAGAGGTTAAACTGGCGGAACTTGAAGCCGATCTACTTGAGATTAATGCAAATAATGAAAAGTTGCAACATGCTTATAATGAGCTTATAGAGTATAAGCTTGTTCTAGAGAAGGTTGGAGAGTTTTTTCCTTCCGCGCAAAATGGCGCTGTAGTTCGCCAAAGAGAACTTGGAGTTCAACCAATTGTCGAAGGGACTATTGACAGTCCATTATTAATTGAACAAGAGACAACAACATATCTGGTAAATCAGATTAAACTCGGGTTTATATGTGGTCTTGTTAATAGGGAAAAATCAATTCCGTTTGAACGAATTTTATTTCGTGCTACTAGAGGAAATGTGTTTCTGAGACAAGCTATGGTTGAAGATTATATTGTGGATCCTTTGTCAGGAGAGAAGGTTCATAAAAATGTGTTTGTTATATTCTATTCTGGAGAGAGAATAAAAAGTAAAATTACCAAAATTTGTGATGCTTTTGGAGCAAATCGTTATCCTTTTTCGGATGATTTGGGTAAACAATTTCAAACGATGACAGAGGTGTCAGGAAAACTTGCAGAATTAAAGACAACTATAGATATGGGTTTACTTCATCGGAGCAATTTGTTGCAGACAGTTGGATATGAATTTGAGCAATGGAACCTTTTGTTGAAGAAGGAAAAATCCATATATCACATTCTAAATATGCTAAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGATGGTGTCCTCTTTCTGCAACAAGTCAGATTCAGAAAGTATTGTTGCAGGCAACTACAGACTGTAGCTCTCAAGTTGGGGCAATATTTCAAGTTTTACAAACAAAGGAGTTACCTCCCACATATTTTTGCACAAATAAATTTACTGCTTCTTTTCAAGAAATTGTAGATGCATATGGAATTGCCAAATATCAAGAAGCAAATCCCGGTGTATACACGATCATTACATTTCCGTTCCTTTTTGCTGTAATGTTTGGCGATTGGGGTCATGGCATATGCTTACTACTAGCAACATTGTATTTCATAATAAATGAGAAAAAGTTTTCTTCTCAGAAACTTGGAGACATATTAGAAATGGTTTTTGGTGGAAGATATATTATTTTGTTGATGTCTCTCTTCTCAATTTACACCGGATTTATATACAATGAGTTCTTCTCTATTCCTTTTGAACTATTCGGACCAACGGCCTATGGATGTCGCGATTCTTCATGCAGGGATGCTACTACAATAGGTTTGATAAAAATGCGTGACACATATCCATTTGGTGTGGATCCTAAATGGCATGGCACTCGTAGCGAACTTCCATTTCTTAACTCTTTGAAAATGAAGATGTCAATTCTACTCGGAGTATCTCAGATGAATCTCGGAATCATATTGAGTTACTATAATGCAAAATATTTTGAAAACAATATAAACATATGGCACCAATTTGTTCCGCAGATGATATTCTTGAATAGCCTATTTGGATACCTTTCACTCCTCATAATTGTAAAATGGTGCACTGGATCACAGGCTGACCTCTATCATGTCATGATATACATGTTCCTAAGTCCAACAGATGATTTGGGTGAAAACCAACTCTTTACAGGACAAAAGTTTCTTCAAGTTATATTACTACTTTTGGCACTTGTTGCTGTACCATGGATGTTATTGCCAAAGCCTTTTCTCCTAAAGAAACAACATAGAGAAAGGCATAAAGGTCAATCTTACTCTCTGCTCTTTGCCGGGGATGATCCTCTTGAATCACAGTCAGATGGTGTTCATCGTGACAATGATGATTTTGATTTCAGTGAGATTTTTGTGCACCAACTTATACATACAATAGAATTTGTTCTTGGAGCTGTGTCCAATACTGCTTCATATCTTCGGTTATGGGCCCTCAGTCTAGCTCATTCCGAGTTGTCAAGCGTTTTCTATGACAAAGTTTTACTTCTGGCTCTCGGGTATAACAATACGATTGTGCTCATTGTTGGCATTATCGTTTTTATAAGTGCGACAGTTGGAGTCTTGTTGGTAATGGAAAGTTTAAGTGCTTTCTTGCATGCTTTAAGACTTCATTGGGTAGAGTTCCAGAACAAATTTTATGAAGGAGATGGTTACAAGTTCTTACCATTTGCATTTGCAACCCTTGGCGATGAGGATGGGCTGTAG 2457 0.3712 MENEHYSSSTMDMLRSEPMQLAQLIIPIESAHRTISYLGDLGLFQFKDLNEDKSPFQRTYASQVKRCGEMTRTMRLFKEQMTKASISPSTLSTPADVDLEKLEVKLAELEADLLEINANNEKLQHAYNELIEYKLVLEKVGEFFPSAQNGAVVRQRELGVQPIVEGTIDSPLLIEQETTTYLVNQIKLGFICGLVNREKSIPFERILFRATRGNVFLRQAMVEDYIVDPLSGEKVHKNVFVIFYSGERIKSKITKICDAFGANRYPFSDDLGKQFQTMTEVSGKLAELKTTIDMGLLHRSNLLQTVGYEFEQWNLLLKKEKSIYHILNMLSINVTKKCLLAEGWCPLSATSQIQKVLLQATTDCSSQVGAIFQVLQTKELPPTYFCTNKFTASFQEIVDAYGIAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFIINEKKFSSQKLGDILEMVFGGRYIILLMSLFSIYTGFIYNEFFSIPFELFGPTAYGCRDSSCRDATTIGLIKMRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIILSYYNAKYFENNINIWHQFVPQMIFLNSLFGYLSLLIIVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFTGQKFLQVILLLLALVAVPWMLLPKPFLLKKQHRERHKGQSYSLLFAGDDPLESQSDGVHRDNDDFDFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLALGYNNTIVLIVGIIVFISATVGVLLVMESLSAFLHALRLHWVEFQNKFYEGDGYKFLPFAFATLGDEDGL 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi3g00535 818 Pfam V-type ATPase 116kDa subunit family 37 809 IPR002490 GO:0033179|GO:0046961|GO:1902600
Vivi3g00535 818 Coils Coil 99 126 - -
Vivi3g00535 818 PIRSF ATP6V0A1 9 817 IPR026028 GO:0000220|GO:0046961
Vivi3g00535 818 PANTHER VACUOLAR PROTON ATPASES 13 812 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi3g00535 Vivi-Chr3 9032972 9038088 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi3g00535 11 816 Primary Pumps ATPases(2) AT2G21410 71.747 0.0 1217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi3g00535 K02154 - gmx:100805813 1337.4